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Cluster: HRGMv2_0300_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0300_8 HRGMv2_0300_8_13 18178 21345 + 1.B.14.6.1
pfam HRGMv2_0300_8 HRGMv2_0300_8_14 21365 23380 + SusD_RagB | SusD-like_3
TC HRGMv2_0300_8 HRGMv2_0300_8_15 23450 26446 + 1.B.14.6.2
pfam HRGMv2_0300_8 HRGMv2_0300_8_16 26472 28229 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0300_8 HRGMv2_0300_8_17 28307 29752 - PL9_1
CAZyme HRGMv2_0300_8 HRGMv2_0300_8_18 29814 31658 - PL11_1
CAZyme HRGMv2_0300_8 HRGMv2_0300_8_19 32462 34078 + CE12 | CE12
pfam HRGMv2_0300_8 HRGMv2_0300_8_20 34105 34422 + rhaM
CAZyme HRGMv2_0300_8 HRGMv2_0300_8_21 34463 35698 + CE12
CAZyme HRGMv2_0300_8 HRGMv2_0300_8_22 35711 38083 + GH2
CAZyme HRGMv2_0300_8 HRGMv2_0300_8_23 38152 40605 + GH106
CAZyme HRGMv2_0300_8 HRGMv2_0300_8_24 40602 41723 + GH105
Gene ID: HRGMv2_0300_8_13
Type: TC
Location: 18178 - 21345 (+)
Gene ID: HRGMv2_0300_8_14
Type: pfam
Location: 21365 - 23380 (+)
Gene ID: HRGMv2_0300_8_15
Type: TC
Location: 23450 - 26446 (+)
Gene ID: HRGMv2_0300_8_16
Type: pfam
Location: 26472 - 28229 (+)
Gene ID: HRGMv2_0300_8_17
Type: CAZyme
Location: 28307 - 29752 (-)
Gene ID: HRGMv2_0300_8_18
Type: CAZyme
Location: 29814 - 31658 (-)
Gene ID: HRGMv2_0300_8_19
Type: CAZyme
Location: 32462 - 34078 (+)
Gene ID: HRGMv2_0300_8_20
Type: pfam
Location: 34105 - 34422 (+)
Gene ID: HRGMv2_0300_8_21
Type: CAZyme
Location: 34463 - 35698 (+)
Gene ID: HRGMv2_0300_8_22
Type: CAZyme
Location: 35711 - 38083 (+)
Gene ID: HRGMv2_0300_8_23
Type: CAZyme
Location: 38152 - 40605 (+)
Gene ID: HRGMv2_0300_8_24
Type: CAZyme
Location: 40602 - 41723 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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