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Cluster: HRGMv2_0300_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0300_6 HRGMv2_0300_6_56 79761 80783 - 9.B.157.1.1
pfam HRGMv2_0300_6 HRGMv2_0300_6_57 80811 81404 - AICARFT_IMPCHas | MGS
pfam HRGMv2_0300_6 HRGMv2_0300_6_58 81913 82077 + Rubredoxin
CAZyme HRGMv2_0300_6 HRGMv2_0300_6_59 82882 84819 + GH51_2
CAZyme HRGMv2_0300_6 HRGMv2_0300_6_60 84942 85961 - GH43_5
CAZyme HRGMv2_0300_6 HRGMv2_0300_6_61 86082 87851 - GH43_4
NULL(UNKNOWN) HRGMv2_0300_6 HRGMv2_0300_6_62 87864 88331 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0300_6 HRGMv2_0300_6_63 88425 90212 - SusD_RagB | SusD-like_3
TC HRGMv2_0300_6 HRGMv2_0300_6_64 90264 93512 - 1.B.14.6.1
pfam HRGMv2_0300_6 HRGMv2_0300_6_65 93532 95310 - SusD_RagB | SusD-like_3
TC HRGMv2_0300_6 HRGMv2_0300_6_66 95336 98434 - 1.B.14.6.1
Gene ID: HRGMv2_0300_6_56
Type: TC
Location: 79761 - 80783 (-)
Gene ID: HRGMv2_0300_6_57
Type: pfam
Location: 80811 - 81404 (-)
Gene ID: HRGMv2_0300_6_58
Type: pfam
Location: 81913 - 82077 (+)
Gene ID: HRGMv2_0300_6_59
Type: CAZyme
Location: 82882 - 84819 (+)
Gene ID: HRGMv2_0300_6_60
Type: CAZyme
Location: 84942 - 85961 (-)
Gene ID: HRGMv2_0300_6_61
Type: CAZyme
Location: 86082 - 87851 (-)
Gene ID: HRGMv2_0300_6_62
Type:
Location: 87864 - 88331 (-)
Gene ID: HRGMv2_0300_6_63
Type: pfam
Location: 88425 - 90212 (-)
Gene ID: HRGMv2_0300_6_64
Type: TC
Location: 90264 - 93512 (-)
Gene ID: HRGMv2_0300_6_65
Type: pfam
Location: 93532 - 95310 (-)
Gene ID: HRGMv2_0300_6_66
Type: TC
Location: 95336 - 98434 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0300_6_57 vegetarian > vegan 2.96761 0.02682

🧭 Explore Read Mapping of CGC

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