Cluster: HRGMv2_0300_CGC24
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 11
- Substrate:
- Genome ID: HRGMv2_0300
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0300_4 | HRGMv2_0300_4_53 | 74939 | 76144 | + | 1.B.57.4.6 |
| pfam | HRGMv2_0300_4 | HRGMv2_0300_4_54 | 76230 | 76709 | + | YgbB |
| NULL(UNKNOWN) | HRGMv2_0300_4 | HRGMv2_0300_4_55 | 77035 | 77286 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0300_4 | HRGMv2_0300_4_56 | 77792 | 79066 | + | GT4 |
| CAZyme | HRGMv2_0300_4 | HRGMv2_0300_4_57 | 79063 | 79839 | + | GT2 |
| TC | HRGMv2_0300_4 | HRGMv2_0300_4_58 | 79869 | 81740 | - | 3.A.3.6.5 |
| CAZyme | HRGMv2_0300_4 | HRGMv2_0300_4_59 | 81984 | 85373 | + | GH142 | GH143 |
| CAZyme | HRGMv2_0300_4 | HRGMv2_0300_4_60 | 85378 | 87747 | + | GH78 |
| CAZyme | HRGMv2_0300_4 | HRGMv2_0300_4_61 | 87689 | 89011 | + | CE19 |
| sulfatase | HRGMv2_0300_4 | HRGMv2_0300_4_62 | 89202 | 90614 | + | S1_20 |
| pfam | HRGMv2_0300_4 | HRGMv2_0300_4_63 | 90782 | 92416 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0300_4 | HRGMv2_0300_4_64 | 92430 | 95567 | - | 1.B.14.6.1 |
| pfam | HRGMv2_0300_4 | HRGMv2_0300_4_65 | 96466 | 98493 | + | Fn3_assoc | CHB_HEX_C_1 |
| pfam | HRGMv2_0300_4 | HRGMv2_0300_4_66 | 98547 | 99638 | + | Endonuclease_NS |
| CAZyme | HRGMv2_0300_4 | HRGMv2_0300_4_67 | 99794 | 102124 | + | GH95 |
| CAZyme | HRGMv2_0300_4 | HRGMv2_0300_4_68 | 102163 | 103629 | + | GH140 |
| CAZyme | HRGMv2_0300_4 | HRGMv2_0300_4_69 | 103634 | 107650 | + | CBM67 | GH33 | GH78 |
| CAZyme | HRGMv2_0300_4 | HRGMv2_0300_4_70 | 107877 | 110549 | + | GH138 |
| CAZyme | HRGMv2_0300_4 | HRGMv2_0300_4_71 | 110631 | 114572 | + | CBM57 | CBM97 | GH137 | GH2 |
| CAZyme | HRGMv2_0300_4 | HRGMv2_0300_4_72 | 114569 | 118006 | + | GH2 |
Gene ID: HRGMv2_0300_4_53
Type: TC
Location: 74939 - 76144 (+)
Type: TC
Location: 74939 - 76144 (+)
Gene ID: HRGMv2_0300_4_54
Type: pfam
Location: 76230 - 76709 (+)
Type: pfam
Location: 76230 - 76709 (+)
Gene ID: HRGMv2_0300_4_55
Type:
Location: 77035 - 77286 (-)
Type:
Location: 77035 - 77286 (-)
Gene ID: HRGMv2_0300_4_56
Type: CAZyme
Location: 77792 - 79066 (+)
Type: CAZyme
Location: 77792 - 79066 (+)
Gene ID: HRGMv2_0300_4_57
Type: CAZyme
Location: 79063 - 79839 (+)
Type: CAZyme
Location: 79063 - 79839 (+)
Gene ID: HRGMv2_0300_4_58
Type: TC
Location: 79869 - 81740 (-)
Type: TC
Location: 79869 - 81740 (-)
Gene ID: HRGMv2_0300_4_59
Type: CAZyme
Location: 81984 - 85373 (+)
Type: CAZyme
Location: 81984 - 85373 (+)
Gene ID: HRGMv2_0300_4_60
Type: CAZyme
Location: 85378 - 87747 (+)
Type: CAZyme
Location: 85378 - 87747 (+)
Gene ID: HRGMv2_0300_4_61
Type: CAZyme
Location: 87689 - 89011 (+)
Type: CAZyme
Location: 87689 - 89011 (+)
Gene ID: HRGMv2_0300_4_62
Type: sulfatase
Location: 89202 - 90614 (+)
Type: sulfatase
Location: 89202 - 90614 (+)
Gene ID: HRGMv2_0300_4_63
Type: pfam
Location: 90782 - 92416 (-)
Type: pfam
Location: 90782 - 92416 (-)
Gene ID: HRGMv2_0300_4_64
Type: TC
Location: 92430 - 95567 (-)
Type: TC
Location: 92430 - 95567 (-)
Gene ID: HRGMv2_0300_4_65
Type: pfam
Location: 96466 - 98493 (+)
Type: pfam
Location: 96466 - 98493 (+)
Gene ID: HRGMv2_0300_4_66
Type: pfam
Location: 98547 - 99638 (+)
Type: pfam
Location: 98547 - 99638 (+)
Gene ID: HRGMv2_0300_4_67
Type: CAZyme
Location: 99794 - 102124 (+)
Type: CAZyme
Location: 99794 - 102124 (+)
Gene ID: HRGMv2_0300_4_68
Type: CAZyme
Location: 102163 - 103629 (+)
Type: CAZyme
Location: 102163 - 103629 (+)
Gene ID: HRGMv2_0300_4_69
Type: CAZyme
Location: 103634 - 107650 (+)
Type: CAZyme
Location: 103634 - 107650 (+)
Gene ID: HRGMv2_0300_4_70
Type: CAZyme
Location: 107877 - 110549 (+)
Type: CAZyme
Location: 107877 - 110549 (+)
Gene ID: HRGMv2_0300_4_71
Type: CAZyme
Location: 110631 - 114572 (+)
Type: CAZyme
Location: 110631 - 114572 (+)
Gene ID: HRGMv2_0300_4_72
Type: CAZyme
Location: 114569 - 118006 (+)
Type: CAZyme
Location: 114569 - 118006 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella buccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.