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Cluster: HRGMv2_0300_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0300_1 HRGMv2_0300_1_215 246507 247907 - 9.B.168.1.2
peptidase HRGMv2_0300_1 HRGMv2_0300_1_216 248003 249613 + C26.964
TC HRGMv2_0300_1 HRGMv2_0300_1_217 249629 251527 + 2.A.9.3.1
peptidase HRGMv2_0300_1 HRGMv2_0300_1_218 251541 253712 + S09.UPC
TC HRGMv2_0300_1 HRGMv2_0300_1_219 253820 255232 + 2.A.1.53.5
TC HRGMv2_0300_1 HRGMv2_0300_1_220 255367 255927 + 2.A.37.1.1
CAZyme HRGMv2_0300_1 HRGMv2_0300_1_221 256446 257669 - GT2
NULL(UNKNOWN) HRGMv2_0300_1 HRGMv2_0300_1_222 257718 258119 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0300_1 HRGMv2_0300_1_223 258210 258821 - Toprim | RecR_ZnF | Toprim_4 | RecR_C | RecR_HhH
TC HRGMv2_0300_1 HRGMv2_0300_1_224 258833 260359 - 2.A.114.1.4
Gene ID: HRGMv2_0300_1_215
Type: TC
Location: 246507 - 247907 (-)
Gene ID: HRGMv2_0300_1_216
Type: peptidase
Location: 248003 - 249613 (+)
Gene ID: HRGMv2_0300_1_217
Type: TC
Location: 249629 - 251527 (+)
Gene ID: HRGMv2_0300_1_218
Type: peptidase
Location: 251541 - 253712 (+)
Gene ID: HRGMv2_0300_1_219
Type: TC
Location: 253820 - 255232 (+)
Gene ID: HRGMv2_0300_1_220
Type: TC
Location: 255367 - 255927 (+)
Gene ID: HRGMv2_0300_1_221
Type: CAZyme
Location: 256446 - 257669 (-)
Gene ID: HRGMv2_0300_1_222
Type:
Location: 257718 - 258119 (-)
Gene ID: HRGMv2_0300_1_223
Type: pfam
Location: 258210 - 258821 (-)
Gene ID: HRGMv2_0300_1_224
Type: TC
Location: 258833 - 260359 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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