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Cluster: HRGMv2_0300_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0300_3 HRGMv2_0300_3_90 104557 106629 + 3.A.25.1.1
pfam HRGMv2_0300_3 HRGMv2_0300_3_91 106642 107514 + CTP_transf_1
CAZyme HRGMv2_0300_3 HRGMv2_0300_3_92 107568 108521 + GH5_2
CAZyme HRGMv2_0300_3 HRGMv2_0300_3_93 108583 109731 - GT19
pfam HRGMv2_0300_3 HRGMv2_0300_3_94 109789 110562 - SurE
TC HRGMv2_0300_3 HRGMv2_0300_3_95 110674 111438 + 8.A.3.2.3
pfam HRGMv2_0300_3 HRGMv2_0300_3_96 111553 112461 + ParBc | HTH_ParB | ParB_dimer
pfam HRGMv2_0300_3 HRGMv2_0300_3_97 112472 113185 + DUF5683
CAZyme HRGMv2_0300_3 HRGMv2_0300_3_98 113229 114575 + GH23
STP HRGMv2_0300_3 HRGMv2_0300_3_99 114685 116979 + HD
CAZyme HRGMv2_0300_3 HRGMv2_0300_3_100 117098 118075 + CE8
NULL(UNKNOWN) HRGMv2_0300_3 HRGMv2_0300_3_101 118444 119988 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0300_3 HRGMv2_0300_3_102 120678 123779 + 1.B.14.6.1
pfam HRGMv2_0300_3 HRGMv2_0300_3_103 123822 125864 + SusD_RagB | SusD-like_2 | SusD-like_3
TC HRGMv2_0300_3 HRGMv2_0300_3_104 126064 129213 + 1.B.14.6.1
TC HRGMv2_0300_3 HRGMv2_0300_3_105 129225 130964 + 8.A.46.1.6
Gene ID: HRGMv2_0300_3_90
Type: TC
Location: 104557 - 106629 (+)
Gene ID: HRGMv2_0300_3_91
Type: pfam
Location: 106642 - 107514 (+)
Gene ID: HRGMv2_0300_3_92
Type: CAZyme
Location: 107568 - 108521 (+)
Gene ID: HRGMv2_0300_3_93
Type: CAZyme
Location: 108583 - 109731 (-)
Gene ID: HRGMv2_0300_3_94
Type: pfam
Location: 109789 - 110562 (-)
Gene ID: HRGMv2_0300_3_95
Type: TC
Location: 110674 - 111438 (+)
Gene ID: HRGMv2_0300_3_96
Type: pfam
Location: 111553 - 112461 (+)
Gene ID: HRGMv2_0300_3_97
Type: pfam
Location: 112472 - 113185 (+)
Gene ID: HRGMv2_0300_3_98
Type: CAZyme
Location: 113229 - 114575 (+)
Gene ID: HRGMv2_0300_3_99
Type: STP
Location: 114685 - 116979 (+)
Gene ID: HRGMv2_0300_3_100
Type: CAZyme
Location: 117098 - 118075 (+)
Gene ID: HRGMv2_0300_3_101
Type:
Location: 118444 - 119988 (+)
Gene ID: HRGMv2_0300_3_102
Type: TC
Location: 120678 - 123779 (+)
Gene ID: HRGMv2_0300_3_103
Type: pfam
Location: 123822 - 125864 (+)
Gene ID: HRGMv2_0300_3_104
Type: TC
Location: 126064 - 129213 (+)
Gene ID: HRGMv2_0300_3_105
Type: TC
Location: 129225 - 130964 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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