Cluster: HRGMv2_0300_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0300
- CGC Family ID: CGCFAM_00005
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0300_3 | HRGMv2_0300_3_66 | 77782 | 78687 | + | GT2 |
| CAZyme | HRGMv2_0300_3 | HRGMv2_0300_3_67 | 78684 | 79472 | + | GT2 |
| CAZyme | HRGMv2_0300_3 | HRGMv2_0300_3_68 | 79505 | 80569 | + | GT4 |
| TC | HRGMv2_0300_3 | HRGMv2_0300_3_69 | 80766 | 81431 | + | 9.B.18.1.3 |
| pfam | HRGMv2_0300_3 | HRGMv2_0300_3_70 | 81553 | 82029 | - | Lipocalin_8 |
| TC | HRGMv2_0300_3 | HRGMv2_0300_3_71 | 82034 | 83605 | - | 1.B.73.2.2 |
Gene ID: HRGMv2_0300_3_66
Type: CAZyme
Location: 77782 - 78687 (+)
Type: CAZyme
Location: 77782 - 78687 (+)
Gene ID: HRGMv2_0300_3_67
Type: CAZyme
Location: 78684 - 79472 (+)
Type: CAZyme
Location: 78684 - 79472 (+)
Gene ID: HRGMv2_0300_3_68
Type: CAZyme
Location: 79505 - 80569 (+)
Type: CAZyme
Location: 79505 - 80569 (+)
Gene ID: HRGMv2_0300_3_69
Type: TC
Location: 80766 - 81431 (+)
Type: TC
Location: 80766 - 81431 (+)
Gene ID: HRGMv2_0300_3_70
Type: pfam
Location: 81553 - 82029 (-)
Type: pfam
Location: 81553 - 82029 (-)
Gene ID: HRGMv2_0300_3_71
Type: TC
Location: 82034 - 83605 (-)
Type: TC
Location: 82034 - 83605 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella buccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.