Cluster: HRGMv2_0300_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0300
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0300_2 | HRGMv2_0300_2_169 | 232244 | 233920 | + | GH10 |
| NULL(UNKNOWN) | HRGMv2_0300_2 | HRGMv2_0300_2_170 | 234244 | 234378 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0300_2 | HRGMv2_0300_2_171 | 234452 | 235663 | - | Asp_protease_2 |
| CAZyme | HRGMv2_0300_2 | HRGMv2_0300_2_172 | 235971 | 237656 | + | CBM91 | GH43_12 |
| pfam | HRGMv2_0300_2 | HRGMv2_0300_2_173 | 237813 | 238778 | + | Dus |
| TC | HRGMv2_0300_2 | HRGMv2_0300_2_174 | 238842 | 239969 | - | 3.A.11.1.3 |
Gene ID: HRGMv2_0300_2_169
Type: CAZyme
Location: 232244 - 233920 (+)
Type: CAZyme
Location: 232244 - 233920 (+)
Gene ID: HRGMv2_0300_2_170
Type:
Location: 234244 - 234378 (-)
Type:
Location: 234244 - 234378 (-)
Gene ID: HRGMv2_0300_2_171
Type: pfam
Location: 234452 - 235663 (-)
Type: pfam
Location: 234452 - 235663 (-)
Gene ID: HRGMv2_0300_2_172
Type: CAZyme
Location: 235971 - 237656 (+)
Type: CAZyme
Location: 235971 - 237656 (+)
Gene ID: HRGMv2_0300_2_173
Type: pfam
Location: 237813 - 238778 (+)
Type: pfam
Location: 237813 - 238778 (+)
Gene ID: HRGMv2_0300_2_174
Type: TC
Location: 238842 - 239969 (-)
Type: TC
Location: 238842 - 239969 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella buccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0300_2_173 | vegetarian > vegan | 1.01779 | 0.02682 |