Cluster: HRGMv2_0300_CGC13
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 10
- Substrate:
- Genome ID: HRGMv2_0300
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0300_2 | HRGMv2_0300_2_150 | 194590 | 196539 | + | CE1 | CE6 |
| CAZyme | HRGMv2_0300_2 | HRGMv2_0300_2_151 | 196585 | 199128 | + | GH115 |
| CAZyme | HRGMv2_0300_2 | HRGMv2_0300_2_152 | 199721 | 202075 | + | CBM91 | CE1 | GH43_10 |
| pfam | HRGMv2_0300_2 | HRGMv2_0300_2_153 | 202176 | 202736 | - | Flavin_Reduct |
| TF | HRGMv2_0300_2 | HRGMv2_0300_2_154 | 202827 | 206723 | - | HTH_AraC |
| CAZyme | HRGMv2_0300_2 | HRGMv2_0300_2_155 | 206911 | 208947 | - | GH127 |
| NULL(UNKNOWN) | HRGMv2_0300_2 | HRGMv2_0300_2_156 | 209416 | 210060 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0300_2 | HRGMv2_0300_2_157 | 210106 | 211386 | - | GH105 |
| CAZyme | HRGMv2_0300_2 | HRGMv2_0300_2_158 | 211412 | 212674 | - | GH154 |
| CAZyme | HRGMv2_0300_2 | HRGMv2_0300_2_159 | 212797 | 213933 | - | GH43_24 |
| CAZyme | HRGMv2_0300_2 | HRGMv2_0300_2_160 | 214160 | 215404 | - | CE1 |
| CAZyme | HRGMv2_0300_2 | HRGMv2_0300_2_161 | 215785 | 218361 | + | GH3 |
| CAZyme | HRGMv2_0300_2 | HRGMv2_0300_2_162 | 218940 | 220967 | + | GH5_21 |
| TC | HRGMv2_0300_2 | HRGMv2_0300_2_163 | 221076 | 223871 | + | 1.B.14.6.1 |
Gene ID: HRGMv2_0300_2_150
Type: CAZyme
Location: 194590 - 196539 (+)
Type: CAZyme
Location: 194590 - 196539 (+)
Gene ID: HRGMv2_0300_2_151
Type: CAZyme
Location: 196585 - 199128 (+)
Type: CAZyme
Location: 196585 - 199128 (+)
Gene ID: HRGMv2_0300_2_152
Type: CAZyme
Location: 199721 - 202075 (+)
Type: CAZyme
Location: 199721 - 202075 (+)
Gene ID: HRGMv2_0300_2_153
Type: pfam
Location: 202176 - 202736 (-)
Type: pfam
Location: 202176 - 202736 (-)
Gene ID: HRGMv2_0300_2_154
Type: TF
Location: 202827 - 206723 (-)
Type: TF
Location: 202827 - 206723 (-)
Gene ID: HRGMv2_0300_2_155
Type: CAZyme
Location: 206911 - 208947 (-)
Type: CAZyme
Location: 206911 - 208947 (-)
Gene ID: HRGMv2_0300_2_156
Type:
Location: 209416 - 210060 (+)
Type:
Location: 209416 - 210060 (+)
Gene ID: HRGMv2_0300_2_157
Type: CAZyme
Location: 210106 - 211386 (-)
Type: CAZyme
Location: 210106 - 211386 (-)
Gene ID: HRGMv2_0300_2_158
Type: CAZyme
Location: 211412 - 212674 (-)
Type: CAZyme
Location: 211412 - 212674 (-)
Gene ID: HRGMv2_0300_2_159
Type: CAZyme
Location: 212797 - 213933 (-)
Type: CAZyme
Location: 212797 - 213933 (-)
Gene ID: HRGMv2_0300_2_160
Type: CAZyme
Location: 214160 - 215404 (-)
Type: CAZyme
Location: 214160 - 215404 (-)
Gene ID: HRGMv2_0300_2_161
Type: CAZyme
Location: 215785 - 218361 (+)
Type: CAZyme
Location: 215785 - 218361 (+)
Gene ID: HRGMv2_0300_2_162
Type: CAZyme
Location: 218940 - 220967 (+)
Type: CAZyme
Location: 218940 - 220967 (+)
Gene ID: HRGMv2_0300_2_163
Type: TC
Location: 221076 - 223871 (+)
Type: TC
Location: 221076 - 223871 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella buccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.