Cluster: HRGMv2_0300_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0300
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0300_2 | HRGMv2_0300_2_137 | 167880 | 171071 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0300_2 | HRGMv2_0300_2_138 | 171119 | 172645 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | HRGMv2_0300_2 | HRGMv2_0300_2_139 | 172669 | 174552 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0300_2 | HRGMv2_0300_2_140 | 174668 | 175774 | + | GH16_3 |
| CAZyme | HRGMv2_0300_2 | HRGMv2_0300_2_141 | 175821 | 178112 | + | GH3 |
Gene ID: HRGMv2_0300_2_137
Type: TC
Location: 167880 - 171071 (+)
Type: TC
Location: 167880 - 171071 (+)
Gene ID: HRGMv2_0300_2_138
Type: pfam
Location: 171119 - 172645 (+)
Type: pfam
Location: 171119 - 172645 (+)
Gene ID: HRGMv2_0300_2_139
Type:
Location: 172669 - 174552 (+)
Type:
Location: 172669 - 174552 (+)
Gene ID: HRGMv2_0300_2_140
Type: CAZyme
Location: 174668 - 175774 (+)
Type: CAZyme
Location: 174668 - 175774 (+)
Gene ID: HRGMv2_0300_2_141
Type: CAZyme
Location: 175821 - 178112 (+)
Type: CAZyme
Location: 175821 - 178112 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella buccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.