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Cluster: HRGMv2_0300_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0300_2 HRGMv2_0300_2_84 98400 99290 - GT2
sulfatase HRGMv2_0300_2 HRGMv2_0300_2_85 99301 99927 - S1_7
TC HRGMv2_0300_2 HRGMv2_0300_2_86 99944 100915 - 2.A.115.1.5
pfam HRGMv2_0300_2 HRGMv2_0300_2_87 100937 103936 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1_2
TC HRGMv2_0300_2 HRGMv2_0300_2_88 104081 104731 + 9.B.20.1.4
CAZyme HRGMv2_0300_2 HRGMv2_0300_2_89 104818 107337 + PL1_2
pfam HRGMv2_0300_2 HRGMv2_0300_2_90 107919 108920 + Fic | Virulence_RhuM
NULL(UNKNOWN) HRGMv2_0300_2 HRGMv2_0300_2_91 109163 109531 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0300_2 HRGMv2_0300_2_92 109551 111899 + PL1
NULL(UNKNOWN) HRGMv2_0300_2 HRGMv2_0300_2_93 112216 112359 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0300_2 HRGMv2_0300_2_94 112472 113074 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0300_2 HRGMv2_0300_2_95 113229 114356 - 1.I.1.1.3
TC HRGMv2_0300_2 HRGMv2_0300_2_96 114759 115727 - 8.A.5.1.3
Gene ID: HRGMv2_0300_2_84
Type: CAZyme
Location: 98400 - 99290 (-)
Gene ID: HRGMv2_0300_2_85
Type: sulfatase
Location: 99301 - 99927 (-)
Gene ID: HRGMv2_0300_2_86
Type: TC
Location: 99944 - 100915 (-)
Gene ID: HRGMv2_0300_2_87
Type: pfam
Location: 100937 - 103936 (-)
Gene ID: HRGMv2_0300_2_88
Type: TC
Location: 104081 - 104731 (+)
Gene ID: HRGMv2_0300_2_89
Type: CAZyme
Location: 104818 - 107337 (+)
Gene ID: HRGMv2_0300_2_90
Type: pfam
Location: 107919 - 108920 (+)
Gene ID: HRGMv2_0300_2_91
Type:
Location: 109163 - 109531 (+)
Gene ID: HRGMv2_0300_2_92
Type: CAZyme
Location: 109551 - 111899 (+)
Gene ID: HRGMv2_0300_2_93
Type:
Location: 112216 - 112359 (+)
Gene ID: HRGMv2_0300_2_94
Type:
Location: 112472 - 113074 (+)
Gene ID: HRGMv2_0300_2_95
Type: TC
Location: 113229 - 114356 (-)
Gene ID: HRGMv2_0300_2_96
Type: TC
Location: 114759 - 115727 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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