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Cluster: HRGMv2_0299_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0299_131 HRGMv2_0299_131_15 13382 17263 - GT2
pfam HRGMv2_0299_131 HRGMv2_0299_131_16 17404 18444 + Phytase-like
pfam HRGMv2_0299_131 HRGMv2_0299_131_17 18514 19551 - adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | KR | GDP_Man_Dehyd
TC HRGMv2_0299_131 HRGMv2_0299_131_18 19645 20244 - 3.D.6.1.2
TC HRGMv2_0299_131 HRGMv2_0299_131_19 20293 20874 - 3.D.6.1.2
pfam HRGMv2_0299_131 HRGMv2_0299_131_20 20887 21462 - FMN_bind
TC HRGMv2_0299_131 HRGMv2_0299_131_21 21459 22454 - 3.D.6.1.2
TC HRGMv2_0299_131 HRGMv2_0299_131_22 22580 23923 - 3.D.6.1.2
Gene ID: HRGMv2_0299_131_15
Type: CAZyme
Location: 13382 - 17263 (-)
Gene ID: HRGMv2_0299_131_16
Type: pfam
Location: 17404 - 18444 (+)
Gene ID: HRGMv2_0299_131_17
Type: pfam
Location: 18514 - 19551 (-)
Gene ID: HRGMv2_0299_131_18
Type: TC
Location: 19645 - 20244 (-)
Gene ID: HRGMv2_0299_131_19
Type: TC
Location: 20293 - 20874 (-)
Gene ID: HRGMv2_0299_131_20
Type: pfam
Location: 20887 - 21462 (-)
Gene ID: HRGMv2_0299_131_21
Type: TC
Location: 21459 - 22454 (-)
Gene ID: HRGMv2_0299_131_22
Type: TC
Location: 22580 - 23923 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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