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Cluster: HRGMv2_0299_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0299_62 HRGMv2_0299_62_17 15354 17741 - GH2
CAZyme HRGMv2_0299_62 HRGMv2_0299_62_18 17771 18865 - GH53
TF HRGMv2_0299_62 HRGMv2_0299_62_19 19139 20509 + TrmB
TC HRGMv2_0299_62 HRGMv2_0299_62_20 20677 21072 - 9.B.124.1.3
peptidase HRGMv2_0299_62 HRGMv2_0299_62_21 21306 21971 + S14.001
STP HRGMv2_0299_62 HRGMv2_0299_62_22 21984 23213 + AAA
TC HRGMv2_0299_62 HRGMv2_0299_62_23 23279 25453 + 2.A.16.2.2
NULL(UNKNOWN) HRGMv2_0299_62 HRGMv2_0299_62_24 26322 26741 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0299_62 HRGMv2_0299_62_25 27854 30565 + 3.A.3.2.42
pfam HRGMv2_0299_62 HRGMv2_0299_62_26 31033 31410 - Ribonuc_L-PSP
TC HRGMv2_0299_62 HRGMv2_0299_62_27 31427 32173 - 1.B.44.1.2
pfam HRGMv2_0299_62 HRGMv2_0299_62_28 32653 33663 + F_bP_aldolase
peptidase HRGMv2_0299_62 HRGMv2_0299_62_29 33805 35469 - C44.UNW
TC HRGMv2_0299_62 HRGMv2_0299_62_30 35663 36940 - 1.A.11.1.4
Gene ID: HRGMv2_0299_62_17
Type: CAZyme
Location: 15354 - 17741 (-)
Gene ID: HRGMv2_0299_62_18
Type: CAZyme
Location: 17771 - 18865 (-)
Gene ID: HRGMv2_0299_62_19
Type: TF
Location: 19139 - 20509 (+)
Gene ID: HRGMv2_0299_62_20
Type: TC
Location: 20677 - 21072 (-)
Gene ID: HRGMv2_0299_62_21
Type: peptidase
Location: 21306 - 21971 (+)
Gene ID: HRGMv2_0299_62_22
Type: STP
Location: 21984 - 23213 (+)
Gene ID: HRGMv2_0299_62_23
Type: TC
Location: 23279 - 25453 (+)
Gene ID: HRGMv2_0299_62_24
Type:
Location: 26322 - 26741 (-)
Gene ID: HRGMv2_0299_62_25
Type: TC
Location: 27854 - 30565 (+)
Gene ID: HRGMv2_0299_62_26
Type: pfam
Location: 31033 - 31410 (-)
Gene ID: HRGMv2_0299_62_27
Type: TC
Location: 31427 - 32173 (-)
Gene ID: HRGMv2_0299_62_28
Type: pfam
Location: 32653 - 33663 (+)
Gene ID: HRGMv2_0299_62_29
Type: peptidase
Location: 33805 - 35469 (-)
Gene ID: HRGMv2_0299_62_30
Type: TC
Location: 35663 - 36940 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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