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Cluster: HRGMv2_0297_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0297_4 HRGMv2_0297_4_75 80503 82878 - 1.B.14.8.2
TF HRGMv2_0297_4 HRGMv2_0297_4_76 82968 85940 - HTH_AraC
sulfatase HRGMv2_0297_4 HRGMv2_0297_4_77 86146 86373 + S1_11
CAZyme HRGMv2_0297_4 HRGMv2_0297_4_78 86391 88739 + GH3
sulfatase HRGMv2_0297_4 HRGMv2_0297_4_79 88846 90039 + S1_48
NULL(UNKNOWN) HRGMv2_0297_4 HRGMv2_0297_4_80 90047 90205 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0297_4 HRGMv2_0297_4_81 90409 91605 + CE1
CAZyme HRGMv2_0297_4 HRGMv2_0297_4_82 91618 93954 + GH3
CAZyme HRGMv2_0297_4 HRGMv2_0297_4_83 94149 96473 - GH20
TC HRGMv2_0297_4 HRGMv2_0297_4_84 96558 99914 + 1.B.14.6.1
Gene ID: HRGMv2_0297_4_75
Type: TC
Location: 80503 - 82878 (-)
Gene ID: HRGMv2_0297_4_76
Type: TF
Location: 82968 - 85940 (-)
Gene ID: HRGMv2_0297_4_77
Type: sulfatase
Location: 86146 - 86373 (+)
Gene ID: HRGMv2_0297_4_78
Type: CAZyme
Location: 86391 - 88739 (+)
Gene ID: HRGMv2_0297_4_79
Type: sulfatase
Location: 88846 - 90039 (+)
Gene ID: HRGMv2_0297_4_80
Type:
Location: 90047 - 90205 (+)
Gene ID: HRGMv2_0297_4_81
Type: CAZyme
Location: 90409 - 91605 (+)
Gene ID: HRGMv2_0297_4_82
Type: CAZyme
Location: 91618 - 93954 (+)
Gene ID: HRGMv2_0297_4_83
Type: CAZyme
Location: 94149 - 96473 (-)
Gene ID: HRGMv2_0297_4_84
Type: TC
Location: 96558 - 99914 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0297_4_81 vegetarian > vegan 1.41156 0.02321

🧭 Explore Read Mapping of CGC

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