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Cluster: HRGMv2_0297_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0297_46 HRGMv2_0297_46_1 28 2250 + GH92
CAZyme HRGMv2_0297_46 HRGMv2_0297_46_2 2356 4638 + GH92
CAZyme HRGMv2_0297_46 HRGMv2_0297_46_3 4654 6930 + GH92
pfam HRGMv2_0297_46 HRGMv2_0297_46_4 7339 8703 + MFS_1 | MFS_1
CAZyme HRGMv2_0297_46 HRGMv2_0297_46_5 8730 9701 + GH130_2
CAZyme HRGMv2_0297_46 HRGMv2_0297_46_6 9777 12053 + GH92
TC HRGMv2_0297_46 HRGMv2_0297_46_7 12305 12946 - 2.A.95.1.4
Gene ID: HRGMv2_0297_46_1
Type: CAZyme
Location: 28 - 2250 (+)
Gene ID: HRGMv2_0297_46_2
Type: CAZyme
Location: 2356 - 4638 (+)
Gene ID: HRGMv2_0297_46_3
Type: CAZyme
Location: 4654 - 6930 (+)
Gene ID: HRGMv2_0297_46_4
Type: pfam
Location: 7339 - 8703 (+)
Gene ID: HRGMv2_0297_46_5
Type: CAZyme
Location: 8730 - 9701 (+)
Gene ID: HRGMv2_0297_46_6
Type: CAZyme
Location: 9777 - 12053 (+)
Gene ID: HRGMv2_0297_46_7
Type: TC
Location: 12305 - 12946 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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