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Cluster: HRGMv2_0297_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0297_26 HRGMv2_0297_26_28 33331 34497 + CE9
CAZyme HRGMv2_0297_26 HRGMv2_0297_26_29 34521 35690 + CE9
CAZyme HRGMv2_0297_26 HRGMv2_0297_26_30 36199 38733 - GH9
TF HRGMv2_0297_26 HRGMv2_0297_26_31 38936 42913 - HTH_AraC
pfam HRGMv2_0297_26 HRGMv2_0297_26_32 43115 44413 + GlcNAc_2-epim
TC HRGMv2_0297_26 HRGMv2_0297_26_33 44455 47655 + 1.B.14.6.1
pfam HRGMv2_0297_26 HRGMv2_0297_26_34 47680 49374 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0297_26 HRGMv2_0297_26_35 49544 50626 + GH5_38
Gene ID: HRGMv2_0297_26_28
Type: CAZyme
Location: 33331 - 34497 (+)
Gene ID: HRGMv2_0297_26_29
Type: CAZyme
Location: 34521 - 35690 (+)
Gene ID: HRGMv2_0297_26_30
Type: CAZyme
Location: 36199 - 38733 (-)
Gene ID: HRGMv2_0297_26_31
Type: TF
Location: 38936 - 42913 (-)
Gene ID: HRGMv2_0297_26_32
Type: pfam
Location: 43115 - 44413 (+)
Gene ID: HRGMv2_0297_26_33
Type: TC
Location: 44455 - 47655 (+)
Gene ID: HRGMv2_0297_26_34
Type: pfam
Location: 47680 - 49374 (+)
Gene ID: HRGMv2_0297_26_35
Type: CAZyme
Location: 49544 - 50626 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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