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Cluster: HRGMv2_0297_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0297_18 HRGMv2_0297_18_23 19830 21170 + 1.A.26.1.2
pfam HRGMv2_0297_18 HRGMv2_0297_18_24 21371 23173 + DUF349 | DUF349 | DUF349 | DUF349 | DUF349
CAZyme HRGMv2_0297_18 HRGMv2_0297_18_25 23333 25882 - GH31_15
pfam HRGMv2_0297_18 HRGMv2_0297_18_26 25903 26991 - Acyl_transf_3
CAZyme HRGMv2_0297_18 HRGMv2_0297_18_27 27089 28147 - GH43_34
CAZyme HRGMv2_0297_18 HRGMv2_0297_18_28 28179 29150 - GH43_3
CAZyme HRGMv2_0297_18 HRGMv2_0297_18_29 29328 32030 - CBM67 | GH78
Gene ID: HRGMv2_0297_18_23
Type: TC
Location: 19830 - 21170 (+)
Gene ID: HRGMv2_0297_18_24
Type: pfam
Location: 21371 - 23173 (+)
Gene ID: HRGMv2_0297_18_25
Type: CAZyme
Location: 23333 - 25882 (-)
Gene ID: HRGMv2_0297_18_26
Type: pfam
Location: 25903 - 26991 (-)
Gene ID: HRGMv2_0297_18_27
Type: CAZyme
Location: 27089 - 28147 (-)
Gene ID: HRGMv2_0297_18_28
Type: CAZyme
Location: 28179 - 29150 (-)
Gene ID: HRGMv2_0297_18_29
Type: CAZyme
Location: 29328 - 32030 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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