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Cluster: HRGMv2_0297_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0297_6 HRGMv2_0297_6_18 16773 18446 - 8.A.46.1.1
TC HRGMv2_0297_6 HRGMv2_0297_6_19 18459 21524 - 1.B.14.6.1
CAZyme HRGMv2_0297_6 HRGMv2_0297_6_20 21683 23863 - GH97
CAZyme HRGMv2_0297_6 HRGMv2_0297_6_21 24028 25881 - GH13_46
pfam HRGMv2_0297_6 HRGMv2_0297_6_22 26098 27720 + DUF6377
NULL(UNKNOWN) HRGMv2_0297_6 HRGMv2_0297_6_23 27777 28523 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0297_6 HRGMv2_0297_6_24 28680 30554 - 3.A.16.1.2
TC HRGMv2_0297_6 HRGMv2_0297_6_25 30647 31978 - 2.A.115.2.14
Gene ID: HRGMv2_0297_6_18
Type: TC
Location: 16773 - 18446 (-)
Gene ID: HRGMv2_0297_6_19
Type: TC
Location: 18459 - 21524 (-)
Gene ID: HRGMv2_0297_6_20
Type: CAZyme
Location: 21683 - 23863 (-)
Gene ID: HRGMv2_0297_6_21
Type: CAZyme
Location: 24028 - 25881 (-)
Gene ID: HRGMv2_0297_6_22
Type: pfam
Location: 26098 - 27720 (+)
Gene ID: HRGMv2_0297_6_23
Type:
Location: 27777 - 28523 (-)
Gene ID: HRGMv2_0297_6_24
Type: TC
Location: 28680 - 30554 (-)
Gene ID: HRGMv2_0297_6_25
Type: TC
Location: 30647 - 31978 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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