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Cluster: HRGMv2_0292_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0292_4 HRGMv2_0292_4_88 100255 101832 - 9.A.25.1.1
TC HRGMv2_0292_4 HRGMv2_0292_4_89 101839 102822 - 9.A.25.1.1
TC HRGMv2_0292_4 HRGMv2_0292_4_90 102853 104283 - 9.A.25.1.1
TC HRGMv2_0292_4 HRGMv2_0292_4_91 104287 105270 - 9.B.172.1.1
TC HRGMv2_0292_4 HRGMv2_0292_4_92 105289 106050 - 1.B.44.1.1
pfam HRGMv2_0292_4 HRGMv2_0292_4_93 106161 107144 - Acyl_transf_3
pfam HRGMv2_0292_4 HRGMv2_0292_4_94 107137 108192 - Acyl_transf_3
CAZyme HRGMv2_0292_4 HRGMv2_0292_4_95 108213 109361 - GT2
pfam HRGMv2_0292_4 HRGMv2_0292_4_96 109735 110499 + Poly_export | SLBB_2
TC HRGMv2_0292_4 HRGMv2_0292_4_97 110546 112888 + 8.A.3.3.4
NULL(UNKNOWN) HRGMv2_0292_4 HRGMv2_0292_4_98 112964 114301 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0292_4 HRGMv2_0292_4_99 114295 115746 + 2.A.50.2.1
NULL(UNKNOWN) HRGMv2_0292_4 HRGMv2_0292_4_100 115762 116697 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0292_4 HRGMv2_0292_4_101 116738 118183 + Polysacc_synt
TC HRGMv2_0292_4 HRGMv2_0292_4_102 118349 119005 + 3.D.10.1.5
TC HRGMv2_0292_4 HRGMv2_0292_4_103 119046 121052 + 3.D.10.1.5
TC HRGMv2_0292_4 HRGMv2_0292_4_104 121077 121832 + 3.D.10.1.5
CAZyme HRGMv2_0292_4 HRGMv2_0292_4_105 122198 123298 - GT4
CAZyme HRGMv2_0292_4 HRGMv2_0292_4_106 123295 124497 - GT4
CAZyme HRGMv2_0292_4 HRGMv2_0292_4_107 124549 125676 - GT4
CAZyme HRGMv2_0292_4 HRGMv2_0292_4_108 125826 126803 + GT2
Gene ID: HRGMv2_0292_4_88
Type: TC
Location: 100255 - 101832 (-)
Gene ID: HRGMv2_0292_4_89
Type: TC
Location: 101839 - 102822 (-)
Gene ID: HRGMv2_0292_4_90
Type: TC
Location: 102853 - 104283 (-)
Gene ID: HRGMv2_0292_4_91
Type: TC
Location: 104287 - 105270 (-)
Gene ID: HRGMv2_0292_4_92
Type: TC
Location: 105289 - 106050 (-)
Gene ID: HRGMv2_0292_4_93
Type: pfam
Location: 106161 - 107144 (-)
Gene ID: HRGMv2_0292_4_94
Type: pfam
Location: 107137 - 108192 (-)
Gene ID: HRGMv2_0292_4_95
Type: CAZyme
Location: 108213 - 109361 (-)
Gene ID: HRGMv2_0292_4_96
Type: pfam
Location: 109735 - 110499 (+)
Gene ID: HRGMv2_0292_4_97
Type: TC
Location: 110546 - 112888 (+)
Gene ID: HRGMv2_0292_4_98
Type:
Location: 112964 - 114301 (+)
Gene ID: HRGMv2_0292_4_99
Type: TC
Location: 114295 - 115746 (+)
Gene ID: HRGMv2_0292_4_100
Type:
Location: 115762 - 116697 (+)
Gene ID: HRGMv2_0292_4_101
Type: pfam
Location: 116738 - 118183 (+)
Gene ID: HRGMv2_0292_4_102
Type: TC
Location: 118349 - 119005 (+)
Gene ID: HRGMv2_0292_4_103
Type: TC
Location: 119046 - 121052 (+)
Gene ID: HRGMv2_0292_4_104
Type: TC
Location: 121077 - 121832 (+)
Gene ID: HRGMv2_0292_4_105
Type: CAZyme
Location: 122198 - 123298 (-)
Gene ID: HRGMv2_0292_4_106
Type: CAZyme
Location: 123295 - 124497 (-)
Gene ID: HRGMv2_0292_4_107
Type: CAZyme
Location: 124549 - 125676 (-)
Gene ID: HRGMv2_0292_4_108
Type: CAZyme
Location: 125826 - 126803 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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