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Cluster: HRGMv2_0292_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0292_1 HRGMv2_0292_1_205 241034 242800 - GH13_38
TC HRGMv2_0292_1 HRGMv2_0292_1_206 242915 244069 - 3.B.1.1.2
pfam HRGMv2_0292_1 HRGMv2_0292_1_207 244072 244509 - Biotin_lipoyl | Biotin_lipoyl_2
pfam HRGMv2_0292_1 HRGMv2_0292_1_208 244545 245522 - OAD_gamma
TC HRGMv2_0292_1 HRGMv2_0292_1_209 245543 247156 - 3.B.1.1.2
STP HRGMv2_0292_1 HRGMv2_0292_1_210 247182 247601 - Glyoxalase
TC HRGMv2_0292_1 HRGMv2_0292_1_211 247920 249848 + 1.A.33.1.2
pfam HRGMv2_0292_1 HRGMv2_0292_1_212 250000 251853 + Metallophos | PQQ | PQQ_2 | PQQ_2 | PQQ_2 | Beta-prop_ACSF4
pfam HRGMv2_0292_1 HRGMv2_0292_1_213 251947 252603 - CBM9_2
TC HRGMv2_0292_1 HRGMv2_0292_1_214 252623 253267 - 2.A.76.1.6
TC HRGMv2_0292_1 HRGMv2_0292_1_215 253873 254508 - 2.A.4.3.9
Gene ID: HRGMv2_0292_1_205
Type: CAZyme
Location: 241034 - 242800 (-)
Gene ID: HRGMv2_0292_1_206
Type: TC
Location: 242915 - 244069 (-)
Gene ID: HRGMv2_0292_1_207
Type: pfam
Location: 244072 - 244509 (-)
Gene ID: HRGMv2_0292_1_208
Type: pfam
Location: 244545 - 245522 (-)
Gene ID: HRGMv2_0292_1_209
Type: TC
Location: 245543 - 247156 (-)
Gene ID: HRGMv2_0292_1_210
Type: STP
Location: 247182 - 247601 (-)
Gene ID: HRGMv2_0292_1_211
Type: TC
Location: 247920 - 249848 (+)
Gene ID: HRGMv2_0292_1_212
Type: pfam
Location: 250000 - 251853 (+)
Gene ID: HRGMv2_0292_1_213
Type: pfam
Location: 251947 - 252603 (-)
Gene ID: HRGMv2_0292_1_214
Type: TC
Location: 252623 - 253267 (-)
Gene ID: HRGMv2_0292_1_215
Type: TC
Location: 253873 - 254508 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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