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Cluster: HRGMv2_0292_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0292_1 HRGMv2_0292_1_190 221635 222726 + 9.B.146.1.4
pfam HRGMv2_0292_1 HRGMv2_0292_1_191 222723 223517 + Poly_export | SLBB_2
TC HRGMv2_0292_1 HRGMv2_0292_1_192 223531 225951 + 8.A.3.3.4
pfam HRGMv2_0292_1 HRGMv2_0292_1_193 225987 227192 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam HRGMv2_0292_1 HRGMv2_0292_1_194 227215 228372 + EpsG
CAZyme HRGMv2_0292_1 HRGMv2_0292_1_195 228380 229378 + GT2
pfam HRGMv2_0292_1 HRGMv2_0292_1_196 229375 230724 + PMT_2
CAZyme HRGMv2_0292_1 HRGMv2_0292_1_197 230726 231784 + GT4
pfam HRGMv2_0292_1 HRGMv2_0292_1_198 231788 232693 + ATPgrasp_TupA
CAZyme HRGMv2_0292_1 HRGMv2_0292_1_199 232703 233401 + GT26
Gene ID: HRGMv2_0292_1_190
Type: TC
Location: 221635 - 222726 (+)
Gene ID: HRGMv2_0292_1_191
Type: pfam
Location: 222723 - 223517 (+)
Gene ID: HRGMv2_0292_1_192
Type: TC
Location: 223531 - 225951 (+)
Gene ID: HRGMv2_0292_1_193
Type: pfam
Location: 225987 - 227192 (+)
Gene ID: HRGMv2_0292_1_194
Type: pfam
Location: 227215 - 228372 (+)
Gene ID: HRGMv2_0292_1_195
Type: CAZyme
Location: 228380 - 229378 (+)
Gene ID: HRGMv2_0292_1_196
Type: pfam
Location: 229375 - 230724 (+)
Gene ID: HRGMv2_0292_1_197
Type: CAZyme
Location: 230726 - 231784 (+)
Gene ID: HRGMv2_0292_1_198
Type: pfam
Location: 231788 - 232693 (+)
Gene ID: HRGMv2_0292_1_199
Type: CAZyme
Location: 232703 - 233401 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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