Cluster: HRGMv2_0292_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: HRGMv2_0292
- CGC Family ID: CGCFAM_00001
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0292_20 | HRGMv2_0292_20_2 | 1333 | 4380 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0292_20 | HRGMv2_0292_20_3 | 4395 | 6152 | + | SusD_RagB | SusD-like_3 |
| pfam | HRGMv2_0292_20 | HRGMv2_0292_20_4 | 6166 | 8199 | + | DUF6259 |
| CAZyme | HRGMv2_0292_20 | HRGMv2_0292_20_5 | 8202 | 11342 | + | GH3 |
Gene ID: HRGMv2_0292_20_2
Type: TC
Location: 1333 - 4380 (+)
Type: TC
Location: 1333 - 4380 (+)
Gene ID: HRGMv2_0292_20_3
Type: pfam
Location: 4395 - 6152 (+)
Type: pfam
Location: 4395 - 6152 (+)
Gene ID: HRGMv2_0292_20_4
Type: pfam
Location: 6166 - 8199 (+)
Type: pfam
Location: 6166 - 8199 (+)
Gene ID: HRGMv2_0292_20_5
Type: CAZyme
Location: 8202 - 11342 (+)
Type: CAZyme
Location: 8202 - 11342 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Sodaliphilus
Species
Sodaliphilus sp934667475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.