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Cluster: HRGMv2_0292_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0292_6 HRGMv2_0292_6_55 63986 65785 - 2.A.58.2.2
pfam HRGMv2_0292_6 HRGMv2_0292_6_56 65926 67635 - AMP-binding | AMP-binding_C
TF HRGMv2_0292_6 HRGMv2_0292_6_57 67699 68268 - HTH_3
CAZyme HRGMv2_0292_6 HRGMv2_0292_6_58 68507 69625 - CE2
pfam HRGMv2_0292_6 HRGMv2_0292_6_59 69741 70484 + adh_short | Epimerase | adh_short_C2
CAZyme HRGMv2_0292_6 HRGMv2_0292_6_60 70491 71636 - GT4
peptidase HRGMv2_0292_6 HRGMv2_0292_6_61 71669 73237 - S16.UNW
pfam HRGMv2_0292_6 HRGMv2_0292_6_62 73282 74376 - DUF4369
CAZyme HRGMv2_0292_6 HRGMv2_0292_6_63 74603 75691 - GT4
pfam HRGMv2_0292_6 HRGMv2_0292_6_64 75905 77008 + CMD | CMD | Cupin_2
pfam HRGMv2_0292_6 HRGMv2_0292_6_65 77123 77830 - DNA_alkylation
TC HRGMv2_0292_6 HRGMv2_0292_6_66 77916 78866 - 8.A.21.2.2
Gene ID: HRGMv2_0292_6_55
Type: TC
Location: 63986 - 65785 (-)
Gene ID: HRGMv2_0292_6_56
Type: pfam
Location: 65926 - 67635 (-)
Gene ID: HRGMv2_0292_6_57
Type: TF
Location: 67699 - 68268 (-)
Gene ID: HRGMv2_0292_6_58
Type: CAZyme
Location: 68507 - 69625 (-)
Gene ID: HRGMv2_0292_6_59
Type: pfam
Location: 69741 - 70484 (+)
Gene ID: HRGMv2_0292_6_60
Type: CAZyme
Location: 70491 - 71636 (-)
Gene ID: HRGMv2_0292_6_61
Type: peptidase
Location: 71669 - 73237 (-)
Gene ID: HRGMv2_0292_6_62
Type: pfam
Location: 73282 - 74376 (-)
Gene ID: HRGMv2_0292_6_63
Type: CAZyme
Location: 74603 - 75691 (-)
Gene ID: HRGMv2_0292_6_64
Type: pfam
Location: 75905 - 77008 (+)
Gene ID: HRGMv2_0292_6_65
Type: pfam
Location: 77123 - 77830 (-)
Gene ID: HRGMv2_0292_6_66
Type: TC
Location: 77916 - 78866 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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