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Cluster: HRGMv2_0292_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0292_5 HRGMv2_0292_5_140 160827 163232 + GT51
peptidase HRGMv2_0292_5 HRGMv2_0292_5_141 163385 164002 + M15.UPD
TC HRGMv2_0292_5 HRGMv2_0292_5_142 164007 166478 - 3.A.11.3.1
CAZyme HRGMv2_0292_5 HRGMv2_0292_5_143 166600 167769 - GT4
pfam HRGMv2_0292_5 HRGMv2_0292_5_144 168157 169815 - Fumerase | Fumerase_C
pfam HRGMv2_0292_5 HRGMv2_0292_5_145 169896 170600 - PseudoU_synth_2
TC HRGMv2_0292_5 HRGMv2_0292_5_146 171416 174772 + 1.B.14.6.2
Gene ID: HRGMv2_0292_5_140
Type: CAZyme
Location: 160827 - 163232 (+)
Gene ID: HRGMv2_0292_5_141
Type: peptidase
Location: 163385 - 164002 (+)
Gene ID: HRGMv2_0292_5_142
Type: TC
Location: 164007 - 166478 (-)
Gene ID: HRGMv2_0292_5_143
Type: CAZyme
Location: 166600 - 167769 (-)
Gene ID: HRGMv2_0292_5_144
Type: pfam
Location: 168157 - 169815 (-)
Gene ID: HRGMv2_0292_5_145
Type: pfam
Location: 169896 - 170600 (-)
Gene ID: HRGMv2_0292_5_146
Type: TC
Location: 171416 - 174772 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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