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Cluster: HRGMv2_0290_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0290_52 HRGMv2_0290_52_66 85079 85789 + 3.A.1.122.2
TC HRGMv2_0290_52 HRGMv2_0290_52_67 86056 87276 - 3.A.1.122.2
TC HRGMv2_0290_52 HRGMv2_0290_52_68 87292 88035 - 3.A.1.122.2
TC HRGMv2_0290_52 HRGMv2_0290_52_69 88236 89399 - 3.A.1.122.12
TC HRGMv2_0290_52 HRGMv2_0290_52_70 90356 91651 - 1.B.17.1.3
pfam HRGMv2_0290_52 HRGMv2_0290_52_71 91991 93040 + NAD_binding_7
TC HRGMv2_0290_52 HRGMv2_0290_52_72 92981 94474 - 2.A.35.1.1
CAZyme HRGMv2_0290_52 HRGMv2_0290_52_73 94631 97051 - GT51
pfam HRGMv2_0290_52 HRGMv2_0290_52_74 97149 98744 + DUF4139
TC HRGMv2_0290_52 HRGMv2_0290_52_75 98945 99847 + 2.A.4.1.7
Gene ID: HRGMv2_0290_52_66
Type: TC
Location: 85079 - 85789 (+)
Gene ID: HRGMv2_0290_52_67
Type: TC
Location: 86056 - 87276 (-)
Gene ID: HRGMv2_0290_52_68
Type: TC
Location: 87292 - 88035 (-)
Gene ID: HRGMv2_0290_52_69
Type: TC
Location: 88236 - 89399 (-)
Gene ID: HRGMv2_0290_52_70
Type: TC
Location: 90356 - 91651 (-)
Gene ID: HRGMv2_0290_52_71
Type: pfam
Location: 91991 - 93040 (+)
Gene ID: HRGMv2_0290_52_72
Type: TC
Location: 92981 - 94474 (-)
Gene ID: HRGMv2_0290_52_73
Type: CAZyme
Location: 94631 - 97051 (-)
Gene ID: HRGMv2_0290_52_74
Type: pfam
Location: 97149 - 98744 (+)
Gene ID: HRGMv2_0290_52_75
Type: TC
Location: 98945 - 99847 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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