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Cluster: HRGMv2_0290_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0290_7 HRGMv2_0290_7_1 195 3254 + 2.A.6.3.6
TC HRGMv2_0290_7 HRGMv2_0290_7_2 3255 6422 + 2.A.6.3.6
CAZyme HRGMv2_0290_7 HRGMv2_0290_7_3 6484 8781 - GH182
NULL(UNKNOWN) HRGMv2_0290_7 HRGMv2_0290_7_4 8787 10973 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0290_7 HRGMv2_0290_7_5 11008 13962 - Laminin_G_3
CAZyme HRGMv2_0290_7 HRGMv2_0290_7_6 14389 16551 + GH141
CAZyme HRGMv2_0290_7 HRGMv2_0290_7_7 16583 18313 + CBM32 | GH43_28
NULL(UNKNOWN) HRGMv2_0290_7 HRGMv2_0290_7_8 18370 20523 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0290_7 HRGMv2_0290_7_9 20619 22508 - GH97
Gene ID: HRGMv2_0290_7_1
Type: TC
Location: 195 - 3254 (+)
Gene ID: HRGMv2_0290_7_2
Type: TC
Location: 3255 - 6422 (+)
Gene ID: HRGMv2_0290_7_3
Type: CAZyme
Location: 6484 - 8781 (-)
Gene ID: HRGMv2_0290_7_4
Type:
Location: 8787 - 10973 (-)
Gene ID: HRGMv2_0290_7_5
Type: pfam
Location: 11008 - 13962 (-)
Gene ID: HRGMv2_0290_7_6
Type: CAZyme
Location: 14389 - 16551 (+)
Gene ID: HRGMv2_0290_7_7
Type: CAZyme
Location: 16583 - 18313 (+)
Gene ID: HRGMv2_0290_7_8
Type:
Location: 18370 - 20523 (-)
Gene ID: HRGMv2_0290_7_9
Type: CAZyme
Location: 20619 - 22508 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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