Cluster: HRGMv2_0290_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0290
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0290_48 | HRGMv2_0290_48_4 | 4536 | 5576 | - | 9.B.97.3.1 |
| NULL(UNKNOWN) | HRGMv2_0290_48 | HRGMv2_0290_48_5 | 5676 | 5930 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0290_48 | HRGMv2_0290_48_6 | 6397 | 8484 | - | GH2 |
| pfam | HRGMv2_0290_48 | HRGMv2_0290_48_7 | 8572 | 9324 | - | Metallophos |
| sulfatase | HRGMv2_0290_48 | HRGMv2_0290_48_8 | 9346 | 10143 | - | S1_63 |
| CAZyme | HRGMv2_0290_48 | HRGMv2_0290_48_9 | 10274 | 12661 | - | GT51 |
Gene ID: HRGMv2_0290_48_4
Type: TC
Location: 4536 - 5576 (-)
Type: TC
Location: 4536 - 5576 (-)
Gene ID: HRGMv2_0290_48_5
Type:
Location: 5676 - 5930 (-)
Type:
Location: 5676 - 5930 (-)
Gene ID: HRGMv2_0290_48_6
Type: CAZyme
Location: 6397 - 8484 (-)
Type: CAZyme
Location: 6397 - 8484 (-)
Gene ID: HRGMv2_0290_48_7
Type: pfam
Location: 8572 - 9324 (-)
Type: pfam
Location: 8572 - 9324 (-)
Gene ID: HRGMv2_0290_48_8
Type: sulfatase
Location: 9346 - 10143 (-)
Type: sulfatase
Location: 9346 - 10143 (-)
Gene ID: HRGMv2_0290_48_9
Type: CAZyme
Location: 10274 - 12661 (-)
Type: CAZyme
Location: 10274 - 12661 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Rikenella
Species
Rikenella microfusus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.