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Cluster: HRGMv2_0290_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0290_34 HRGMv2_0290_34_50 54418 56643 + CE20 | CE3
TC HRGMv2_0290_34 HRGMv2_0290_34_51 56753 58129 + 1.B.17.1.3
pfam HRGMv2_0290_34 HRGMv2_0290_34_52 58782 59771 + tRNA-synt_1b
CAZyme HRGMv2_0290_34 HRGMv2_0290_34_53 59853 62126 - GH92
TF HRGMv2_0290_34 HRGMv2_0290_34_54 62186 62563 - DUF24
peptidase HRGMv2_0290_34 HRGMv2_0290_34_55 62713 63243 + C56.UNW
CAZyme HRGMv2_0290_34 HRGMv2_0290_34_56 63598 66618 + GH92
Gene ID: HRGMv2_0290_34_50
Type: CAZyme
Location: 54418 - 56643 (+)
Gene ID: HRGMv2_0290_34_51
Type: TC
Location: 56753 - 58129 (+)
Gene ID: HRGMv2_0290_34_52
Type: pfam
Location: 58782 - 59771 (+)
Gene ID: HRGMv2_0290_34_53
Type: CAZyme
Location: 59853 - 62126 (-)
Gene ID: HRGMv2_0290_34_54
Type: TF
Location: 62186 - 62563 (-)
Gene ID: HRGMv2_0290_34_55
Type: peptidase
Location: 62713 - 63243 (+)
Gene ID: HRGMv2_0290_34_56
Type: CAZyme
Location: 63598 - 66618 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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