dbCAN Logo

Cluster: HRGMv2_0290_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0290_18 HRGMv2_0290_18_44 54893 56248 - 2.A.66.1.37
pfam HRGMv2_0290_18 HRGMv2_0290_18_45 56635 57087 + PepSY_like
TC HRGMv2_0290_18 HRGMv2_0290_18_46 57186 58646 + 2.A.62.1.3
CAZyme HRGMv2_0290_18 HRGMv2_0290_18_47 59000 61714 + GH2
CAZyme HRGMv2_0290_18 HRGMv2_0290_18_48 61711 63081 + GH171
TC HRGMv2_0290_18 HRGMv2_0290_18_49 63189 63836 - 9.B.20.1.4
TF HRGMv2_0290_18 HRGMv2_0290_18_50 64118 64504 - 0044030
TC HRGMv2_0290_18 HRGMv2_0290_18_51 64844 65995 - 3.D.4.3.2
TC HRGMv2_0290_18 HRGMv2_0290_18_52 66343 67866 - 3.D.4.3.2
Gene ID: HRGMv2_0290_18_44
Type: TC
Location: 54893 - 56248 (-)
Gene ID: HRGMv2_0290_18_45
Type: pfam
Location: 56635 - 57087 (+)
Gene ID: HRGMv2_0290_18_46
Type: TC
Location: 57186 - 58646 (+)
Gene ID: HRGMv2_0290_18_47
Type: CAZyme
Location: 59000 - 61714 (+)
Gene ID: HRGMv2_0290_18_48
Type: CAZyme
Location: 61711 - 63081 (+)
Gene ID: HRGMv2_0290_18_49
Type: TC
Location: 63189 - 63836 (-)
Gene ID: HRGMv2_0290_18_50
Type: TF
Location: 64118 - 64504 (-)
Gene ID: HRGMv2_0290_18_51
Type: TC
Location: 64844 - 65995 (-)
Gene ID: HRGMv2_0290_18_52
Type: TC
Location: 66343 - 67866 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List