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Cluster: HRGMv2_0289_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0289_1 HRGMv2_0289_1_100 111234 112838 + 3.A.2.1.3
TC HRGMv2_0289_1 HRGMv2_0289_1_101 112850 113755 + 3.A.2.1.1
STP HRGMv2_0289_1 HRGMv2_0289_1_102 113777 114415 + Fer4 | Fer4
pfam HRGMv2_0289_1 HRGMv2_0289_1_103 114419 114943 + Oxidored_q3
TC HRGMv2_0289_1 HRGMv2_0289_1_104 114954 115265 + 3.D.1.8.1
TC HRGMv2_0289_1 HRGMv2_0289_1_105 115270 117210 + 3.D.1.3.1
TC HRGMv2_0289_1 HRGMv2_0289_1_106 117280 118788 + 3.D.1.5.1
TC HRGMv2_0289_1 HRGMv2_0289_1_107 118853 120331 + 3.D.1.8.1
pfam HRGMv2_0289_1 HRGMv2_0289_1_108 120621 121103 - Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7
CAZyme HRGMv2_0289_1 HRGMv2_0289_1_109 121160 121825 - GT51
Gene ID: HRGMv2_0289_1_100
Type: TC
Location: 111234 - 112838 (+)
Gene ID: HRGMv2_0289_1_101
Type: TC
Location: 112850 - 113755 (+)
Gene ID: HRGMv2_0289_1_102
Type: STP
Location: 113777 - 114415 (+)
Gene ID: HRGMv2_0289_1_103
Type: pfam
Location: 114419 - 114943 (+)
Gene ID: HRGMv2_0289_1_104
Type: TC
Location: 114954 - 115265 (+)
Gene ID: HRGMv2_0289_1_105
Type: TC
Location: 115270 - 117210 (+)
Gene ID: HRGMv2_0289_1_106
Type: TC
Location: 117280 - 118788 (+)
Gene ID: HRGMv2_0289_1_107
Type: TC
Location: 118853 - 120331 (+)
Gene ID: HRGMv2_0289_1_108
Type: pfam
Location: 120621 - 121103 (-)
Gene ID: HRGMv2_0289_1_109
Type: CAZyme
Location: 121160 - 121825 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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