dbCAN Logo

Cluster: HRGMv2_0289_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0289_8 HRGMv2_0289_8_20 21806 23215 - 1.I.1.1.3
NULL(UNKNOWN) HRGMv2_0289_8 HRGMv2_0289_8_21 23387 24694 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0289_8 HRGMv2_0289_8_22 24826 26304 + 2.A.114.1.4
pfam HRGMv2_0289_8 HRGMv2_0289_8_23 26387 26866 + AhpC-TSA | Redoxin | AhpC-TSA_2
TC HRGMv2_0289_8 HRGMv2_0289_8_24 26943 29339 - 1.B.14.6.7
NULL(UNKNOWN) HRGMv2_0289_8 HRGMv2_0289_8_25 29430 30662 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0289_8 HRGMv2_0289_8_26 30736 31785 - GH53
Gene ID: HRGMv2_0289_8_20
Type: TC
Location: 21806 - 23215 (-)
Gene ID: HRGMv2_0289_8_21
Type:
Location: 23387 - 24694 (+)
Gene ID: HRGMv2_0289_8_22
Type: TC
Location: 24826 - 26304 (+)
Gene ID: HRGMv2_0289_8_23
Type: pfam
Location: 26387 - 26866 (+)
Gene ID: HRGMv2_0289_8_24
Type: TC
Location: 26943 - 29339 (-)
Gene ID: HRGMv2_0289_8_25
Type:
Location: 29430 - 30662 (+)
Gene ID: HRGMv2_0289_8_26
Type: CAZyme
Location: 30736 - 31785 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List