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Cluster: HRGMv2_0285_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0285_18 HRGMv2_0285_18_43 58894 60141 - 3.A.1.122.1
TC HRGMv2_0285_18 HRGMv2_0285_18_44 60184 61443 - 3.A.1.122.2
TC HRGMv2_0285_18 HRGMv2_0285_18_45 61465 62175 - 3.A.1.122.14
TF HRGMv2_0285_18 HRGMv2_0285_18_46 62361 62732 - GntR
NULL(UNKNOWN) HRGMv2_0285_18 HRGMv2_0285_18_47 62782 63633 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0285_18 HRGMv2_0285_18_48 63707 64537 - 3.A.1.132.6
TC HRGMv2_0285_18 HRGMv2_0285_18_49 64778 65434 - 1.C.113.1.3
CAZyme HRGMv2_0285_18 HRGMv2_0285_18_50 65760 67955 + GH36
Gene ID: HRGMv2_0285_18_43
Type: TC
Location: 58894 - 60141 (-)
Gene ID: HRGMv2_0285_18_44
Type: TC
Location: 60184 - 61443 (-)
Gene ID: HRGMv2_0285_18_45
Type: TC
Location: 61465 - 62175 (-)
Gene ID: HRGMv2_0285_18_46
Type: TF
Location: 62361 - 62732 (-)
Gene ID: HRGMv2_0285_18_47
Type:
Location: 62782 - 63633 (-)
Gene ID: HRGMv2_0285_18_48
Type: TC
Location: 63707 - 64537 (-)
Gene ID: HRGMv2_0285_18_49
Type: TC
Location: 64778 - 65434 (-)
Gene ID: HRGMv2_0285_18_50
Type: CAZyme
Location: 65760 - 67955 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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