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Cluster: HRGMv2_0279_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0279_61 HRGMv2_0279_61_10 11303 12286 - GH179
STP HRGMv2_0279_61 HRGMv2_0279_61_11 12450 13229 - NUDIX
TC HRGMv2_0279_61 HRGMv2_0279_61_12 13439 14812 + 2.A.62.1.3
pfam HRGMv2_0279_61 HRGMv2_0279_61_13 14916 15893 + PFK
TC HRGMv2_0279_61 HRGMv2_0279_61_14 16023 17549 + 3.A.2.1.2
pfam HRGMv2_0279_61 HRGMv2_0279_61_15 17579 17821 + ATP-synt_DE_N
NULL(UNKNOWN) HRGMv2_0279_61 HRGMv2_0279_61_16 17837 18265 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0279_61 HRGMv2_0279_61_17 18272 19327 + 3.A.2.1.7
Gene ID: HRGMv2_0279_61_10
Type: CAZyme
Location: 11303 - 12286 (-)
Gene ID: HRGMv2_0279_61_11
Type: STP
Location: 12450 - 13229 (-)
Gene ID: HRGMv2_0279_61_12
Type: TC
Location: 13439 - 14812 (+)
Gene ID: HRGMv2_0279_61_13
Type: pfam
Location: 14916 - 15893 (+)
Gene ID: HRGMv2_0279_61_14
Type: TC
Location: 16023 - 17549 (+)
Gene ID: HRGMv2_0279_61_15
Type: pfam
Location: 17579 - 17821 (+)
Gene ID: HRGMv2_0279_61_16
Type:
Location: 17837 - 18265 (+)
Gene ID: HRGMv2_0279_61_17
Type: TC
Location: 18272 - 19327 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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