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Cluster: HRGMv2_0279_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0279_37 HRGMv2_0279_37_13 16356 19448 - 1.B.14.6.1
TF HRGMv2_0279_37 HRGMv2_0279_37_14 19771 20802 + LacI
TC HRGMv2_0279_37 HRGMv2_0279_37_15 20856 22166 + 2.A.2.6.2
CAZyme HRGMv2_0279_37 HRGMv2_0279_37_16 22306 24978 + GH77
CAZyme HRGMv2_0279_37 HRGMv2_0279_37_17 25050 27185 + GH97
CAZyme HRGMv2_0279_37 HRGMv2_0279_37_18 27185 29146 + GH13_14
CAZyme HRGMv2_0279_37 HRGMv2_0279_37_19 29181 31106 + GH13_46
Gene ID: HRGMv2_0279_37_13
Type: TC
Location: 16356 - 19448 (-)
Gene ID: HRGMv2_0279_37_14
Type: TF
Location: 19771 - 20802 (+)
Gene ID: HRGMv2_0279_37_15
Type: TC
Location: 20856 - 22166 (+)
Gene ID: HRGMv2_0279_37_16
Type: CAZyme
Location: 22306 - 24978 (+)
Gene ID: HRGMv2_0279_37_17
Type: CAZyme
Location: 25050 - 27185 (+)
Gene ID: HRGMv2_0279_37_18
Type: CAZyme
Location: 27185 - 29146 (+)
Gene ID: HRGMv2_0279_37_19
Type: CAZyme
Location: 29181 - 31106 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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