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Cluster: HRGMv2_0279_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0279_20 HRGMv2_0279_20_2 2045 6115 - CBM32 | GH2
TC HRGMv2_0279_20 HRGMv2_0279_20_3 6154 6921 - 3.A.1.147.9
pfam HRGMv2_0279_20 HRGMv2_0279_20_4 7003 9840 - UvrA_DNA-bind | UvrA_inter
sulfatase HRGMv2_0279_20 HRGMv2_0279_20_5 9904 10614 - S1_4
CAZyme HRGMv2_0279_20 HRGMv2_0279_20_6 10745 12121 + CBM50
pfam HRGMv2_0279_20 HRGMv2_0279_20_7 12139 12906 + OMP_b-brl_2
TC HRGMv2_0279_20 HRGMv2_0279_20_8 12972 14498 + 2.A.17.1.6
TC HRGMv2_0279_20 HRGMv2_0279_20_9 14713 17010 + 9.B.14.3.1
CAZyme HRGMv2_0279_20 HRGMv2_0279_20_10 17338 19185 + GH29
Gene ID: HRGMv2_0279_20_2
Type: CAZyme
Location: 2045 - 6115 (-)
Gene ID: HRGMv2_0279_20_3
Type: TC
Location: 6154 - 6921 (-)
Gene ID: HRGMv2_0279_20_4
Type: pfam
Location: 7003 - 9840 (-)
Gene ID: HRGMv2_0279_20_5
Type: sulfatase
Location: 9904 - 10614 (-)
Gene ID: HRGMv2_0279_20_6
Type: CAZyme
Location: 10745 - 12121 (+)
Gene ID: HRGMv2_0279_20_7
Type: pfam
Location: 12139 - 12906 (+)
Gene ID: HRGMv2_0279_20_8
Type: TC
Location: 12972 - 14498 (+)
Gene ID: HRGMv2_0279_20_9
Type: TC
Location: 14713 - 17010 (+)
Gene ID: HRGMv2_0279_20_10
Type: CAZyme
Location: 17338 - 19185 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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