dbCAN Logo

Cluster: HRGMv2_0279_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0279_1 HRGMv2_0279_1_72 101757 103211 + 2.A.35.1.6
CAZyme HRGMv2_0279_1 HRGMv2_0279_1_73 103325 104572 + GH154
sulfatase HRGMv2_0279_1 HRGMv2_0279_1_74 104620 106179 + S1_15
STP HRGMv2_0279_1 HRGMv2_0279_1_75 106557 107888 - Pyr_redox_2
CAZyme HRGMv2_0279_1 HRGMv2_0279_1_76 108121 112023 + GH31_18
TC HRGMv2_0279_1 HRGMv2_0279_1_77 112680 113882 + 2.A.6.2.45
TC HRGMv2_0279_1 HRGMv2_0279_1_78 114081 117332 + 2.A.6.2.22
TC HRGMv2_0279_1 HRGMv2_0279_1_79 117348 118733 + 2.A.6.2.23
pfam HRGMv2_0279_1 HRGMv2_0279_1_80 118935 119708 + Hexapep | Acetyltransf_11
TC HRGMv2_0279_1 HRGMv2_0279_1_81 120028 120597 + 9.B.171.1.2
Gene ID: HRGMv2_0279_1_72
Type: TC
Location: 101757 - 103211 (+)
Gene ID: HRGMv2_0279_1_73
Type: CAZyme
Location: 103325 - 104572 (+)
Gene ID: HRGMv2_0279_1_74
Type: sulfatase
Location: 104620 - 106179 (+)
Gene ID: HRGMv2_0279_1_75
Type: STP
Location: 106557 - 107888 (-)
Gene ID: HRGMv2_0279_1_76
Type: CAZyme
Location: 108121 - 112023 (+)
Gene ID: HRGMv2_0279_1_77
Type: TC
Location: 112680 - 113882 (+)
Gene ID: HRGMv2_0279_1_78
Type: TC
Location: 114081 - 117332 (+)
Gene ID: HRGMv2_0279_1_79
Type: TC
Location: 117348 - 118733 (+)
Gene ID: HRGMv2_0279_1_80
Type: pfam
Location: 118935 - 119708 (+)
Gene ID: HRGMv2_0279_1_81
Type: TC
Location: 120028 - 120597 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List