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Cluster: HRGMv2_0275_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0275_7 HRGMv2_0275_7_58 68428 71517 - 1.B.14.6.1
TF HRGMv2_0275_7 HRGMv2_0275_7_59 71866 72873 + LacI
TC HRGMv2_0275_7 HRGMv2_0275_7_60 72932 74242 + 2.A.2.6.2
CAZyme HRGMv2_0275_7 HRGMv2_0275_7_61 74383 77076 + GH77
CAZyme HRGMv2_0275_7 HRGMv2_0275_7_62 77127 79262 + GH97
CAZyme HRGMv2_0275_7 HRGMv2_0275_7_63 79286 81223 + GH13_14
CAZyme HRGMv2_0275_7 HRGMv2_0275_7_64 81258 83183 + GH13_46
Gene ID: HRGMv2_0275_7_58
Type: TC
Location: 68428 - 71517 (-)
Gene ID: HRGMv2_0275_7_59
Type: TF
Location: 71866 - 72873 (+)
Gene ID: HRGMv2_0275_7_60
Type: TC
Location: 72932 - 74242 (+)
Gene ID: HRGMv2_0275_7_61
Type: CAZyme
Location: 74383 - 77076 (+)
Gene ID: HRGMv2_0275_7_62
Type: CAZyme
Location: 77127 - 79262 (+)
Gene ID: HRGMv2_0275_7_63
Type: CAZyme
Location: 79286 - 81223 (+)
Gene ID: HRGMv2_0275_7_64
Type: CAZyme
Location: 81258 - 83183 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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