Cluster: HRGMv2_0275_CGC48
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0275
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0275_74 | HRGMv2_0275_74_3 | 3937 | 4599 | + | GH25 |
| NULL(UNKNOWN) | HRGMv2_0275_74 | HRGMv2_0275_74_4 | 4668 | 5825 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0275_74 | HRGMv2_0275_74_5 | 5937 | 7688 | + | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | HRGMv2_0275_74 | HRGMv2_0275_74_6 | 7790 | 10000 | + | GH92 |
| NULL(UNKNOWN) | HRGMv2_0275_74 | HRGMv2_0275_74_7 | 10011 | 10169 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0275_74 | HRGMv2_0275_74_8 | 10277 | 11974 | - | 2.A.81.1.2 |
Gene ID: HRGMv2_0275_74_3
Type: CAZyme
Location: 3937 - 4599 (+)
Type: CAZyme
Location: 3937 - 4599 (+)
Gene ID: HRGMv2_0275_74_4
Type:
Location: 4668 - 5825 (+)
Type:
Location: 4668 - 5825 (+)
Gene ID: HRGMv2_0275_74_5
Type: pfam
Location: 5937 - 7688 (+)
Type: pfam
Location: 5937 - 7688 (+)
Gene ID: HRGMv2_0275_74_6
Type: CAZyme
Location: 7790 - 10000 (+)
Type: CAZyme
Location: 7790 - 10000 (+)
Gene ID: HRGMv2_0275_74_7
Type:
Location: 10011 - 10169 (+)
Type:
Location: 10011 - 10169 (+)
Gene ID: HRGMv2_0275_74_8
Type: TC
Location: 10277 - 11974 (-)
Type: TC
Location: 10277 - 11974 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900552515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.