Cluster: HRGMv2_0275_CGC43
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0275
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0275_53 | HRGMv2_0275_53_15 | 13731 | 15986 | - | GH13_28 |
| NULL(UNKNOWN) | HRGMv2_0275_53 | HRGMv2_0275_53_16 | 15998 | 16798 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0275_53 | HRGMv2_0275_53_17 | 17076 | 18278 | + | 2.A.1.7.8 |
| TF | HRGMv2_0275_53 | HRGMv2_0275_53_18 | 18337 | 19362 | - | LacI |
| TC | HRGMv2_0275_53 | HRGMv2_0275_53_19 | 19627 | 20994 | + | 2.A.2.3.2 |
Gene ID: HRGMv2_0275_53_15
Type: CAZyme
Location: 13731 - 15986 (-)
Type: CAZyme
Location: 13731 - 15986 (-)
Gene ID: HRGMv2_0275_53_16
Type:
Location: 15998 - 16798 (-)
Type:
Location: 15998 - 16798 (-)
Gene ID: HRGMv2_0275_53_17
Type: TC
Location: 17076 - 18278 (+)
Type: TC
Location: 17076 - 18278 (+)
Gene ID: HRGMv2_0275_53_18
Type: TF
Location: 18337 - 19362 (-)
Type: TF
Location: 18337 - 19362 (-)
Gene ID: HRGMv2_0275_53_19
Type: TC
Location: 19627 - 20994 (+)
Type: TC
Location: 19627 - 20994 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900552515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.