Cluster: HRGMv2_0275_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0275
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0275_3 | HRGMv2_0275_3_40 | 47717 | 50272 | + | 3.A.9.1.2 |
| pfam | HRGMv2_0275_3 | HRGMv2_0275_3_41 | 50363 | 51814 | - | PK | PK_C |
| TC | HRGMv2_0275_3 | HRGMv2_0275_3_42 | 52037 | 54472 | + | 1.B.14.8.7 |
| NULL(UNKNOWN) | HRGMv2_0275_3 | HRGMv2_0275_3_43 | 54506 | 54958 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0275_3 | HRGMv2_0275_3_44 | 55157 | 56839 | + | GT3 |
| CAZyme | HRGMv2_0275_3 | HRGMv2_0275_3_45 | 56869 | 59424 | + | GT35 |
Gene ID: HRGMv2_0275_3_40
Type: TC
Location: 47717 - 50272 (+)
Type: TC
Location: 47717 - 50272 (+)
Gene ID: HRGMv2_0275_3_41
Type: pfam
Location: 50363 - 51814 (-)
Type: pfam
Location: 50363 - 51814 (-)
Gene ID: HRGMv2_0275_3_42
Type: TC
Location: 52037 - 54472 (+)
Type: TC
Location: 52037 - 54472 (+)
Gene ID: HRGMv2_0275_3_43
Type:
Location: 54506 - 54958 (-)
Type:
Location: 54506 - 54958 (-)
Gene ID: HRGMv2_0275_3_44
Type: CAZyme
Location: 55157 - 56839 (+)
Type: CAZyme
Location: 55157 - 56839 (+)
Gene ID: HRGMv2_0275_3_45
Type: CAZyme
Location: 56869 - 59424 (+)
Type: CAZyme
Location: 56869 - 59424 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900552515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.