Cluster: HRGMv2_0275_CGC28
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0275
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0275_26 | HRGMv2_0275_26_28 | 31231 | 33768 | + | 1.B.14.6.14 |
| TF | HRGMv2_0275_26 | HRGMv2_0275_26_29 | 33852 | 34430 | + | GerE |
| CAZyme | HRGMv2_0275_26 | HRGMv2_0275_26_30 | 34604 | 37765 | + | GH13_42 |
Gene ID: HRGMv2_0275_26_28
Type: TC
Location: 31231 - 33768 (+)
Type: TC
Location: 31231 - 33768 (+)
Gene ID: HRGMv2_0275_26_29
Type: TF
Location: 33852 - 34430 (+)
Type: TF
Location: 33852 - 34430 (+)
Gene ID: HRGMv2_0275_26_30
Type: CAZyme
Location: 34604 - 37765 (+)
Type: CAZyme
Location: 34604 - 37765 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900552515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0275_26_30 | vegetarian > omnivore | 1.58597 | 0.00776 |