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Cluster: HRGMv2_0275_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0275_22 HRGMv2_0275_22_1 130 2679 - CBM32 | GH84
NULL(UNKNOWN) HRGMv2_0275_22 HRGMv2_0275_22_2 2757 3020 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0275_22 HRGMv2_0275_22_3 3096 7169 - CBM32 | GH2
TC HRGMv2_0275_22 HRGMv2_0275_22_4 7209 7910 - 3.A.1.147.9
pfam HRGMv2_0275_22 HRGMv2_0275_22_5 7993 10830 - UvrA_DNA-bind | UvrA_inter
sulfatase HRGMv2_0275_22 HRGMv2_0275_22_6 10893 11567 - S1_4
CAZyme HRGMv2_0275_22 HRGMv2_0275_22_7 11734 13110 + CBM50
pfam HRGMv2_0275_22 HRGMv2_0275_22_8 13128 13895 + OMP_b-brl_2
TC HRGMv2_0275_22 HRGMv2_0275_22_9 13956 15482 + 2.A.17.1.6
TC HRGMv2_0275_22 HRGMv2_0275_22_10 15698 17995 + 9.B.14.3.1
CAZyme HRGMv2_0275_22 HRGMv2_0275_22_11 18103 19950 - GH29
Gene ID: HRGMv2_0275_22_1
Type: CAZyme
Location: 130 - 2679 (-)
Gene ID: HRGMv2_0275_22_2
Type:
Location: 2757 - 3020 (-)
Gene ID: HRGMv2_0275_22_3
Type: CAZyme
Location: 3096 - 7169 (-)
Gene ID: HRGMv2_0275_22_4
Type: TC
Location: 7209 - 7910 (-)
Gene ID: HRGMv2_0275_22_5
Type: pfam
Location: 7993 - 10830 (-)
Gene ID: HRGMv2_0275_22_6
Type: sulfatase
Location: 10893 - 11567 (-)
Gene ID: HRGMv2_0275_22_7
Type: CAZyme
Location: 11734 - 13110 (+)
Gene ID: HRGMv2_0275_22_8
Type: pfam
Location: 13128 - 13895 (+)
Gene ID: HRGMv2_0275_22_9
Type: TC
Location: 13956 - 15482 (+)
Gene ID: HRGMv2_0275_22_10
Type: TC
Location: 15698 - 17995 (+)
Gene ID: HRGMv2_0275_22_11
Type: CAZyme
Location: 18103 - 19950 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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