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Cluster: HRGMv2_0273_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0273_4 HRGMv2_0273_4_88 112946 114214 - GT2
TC HRGMv2_0273_4 HRGMv2_0273_4_89 114217 115605 - 2.A.66.10.1
pfam HRGMv2_0273_4 HRGMv2_0273_4_90 115753 115962 - DUF3791
pfam HRGMv2_0273_4 HRGMv2_0273_4_91 116174 116335 - DUF3791
TC HRGMv2_0273_4 HRGMv2_0273_4_92 116562 119159 - 1.B.18.3.5
STP HRGMv2_0273_4 HRGMv2_0273_4_93 120085 121533 + HD
TC HRGMv2_0273_4 HRGMv2_0273_4_94 121758 122957 + 2.A.6.2.46
TC HRGMv2_0273_4 HRGMv2_0273_4_95 122981 126307 + 2.A.6.2.22
pfam HRGMv2_0273_4 HRGMv2_0273_4_96 126316 127707 + OEP | OEP
pfam HRGMv2_0273_4 HRGMv2_0273_4_97 127746 128525 + Hexapep | Hexapep | Acetyltransf_11
CAZyme HRGMv2_0273_4 HRGMv2_0273_4_98 128696 131272 + GT51
Gene ID: HRGMv2_0273_4_88
Type: CAZyme
Location: 112946 - 114214 (-)
Gene ID: HRGMv2_0273_4_89
Type: TC
Location: 114217 - 115605 (-)
Gene ID: HRGMv2_0273_4_90
Type: pfam
Location: 115753 - 115962 (-)
Gene ID: HRGMv2_0273_4_91
Type: pfam
Location: 116174 - 116335 (-)
Gene ID: HRGMv2_0273_4_92
Type: TC
Location: 116562 - 119159 (-)
Gene ID: HRGMv2_0273_4_93
Type: STP
Location: 120085 - 121533 (+)
Gene ID: HRGMv2_0273_4_94
Type: TC
Location: 121758 - 122957 (+)
Gene ID: HRGMv2_0273_4_95
Type: TC
Location: 122981 - 126307 (+)
Gene ID: HRGMv2_0273_4_96
Type: pfam
Location: 126316 - 127707 (+)
Gene ID: HRGMv2_0273_4_97
Type: pfam
Location: 127746 - 128525 (+)
Gene ID: HRGMv2_0273_4_98
Type: CAZyme
Location: 128696 - 131272 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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