dbCAN Logo

Cluster: HRGMv2_0273_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0273_31 HRGMv2_0273_31_2 1331 3526 + GH89
pfam HRGMv2_0273_31 HRGMv2_0273_31_3 3608 4705 + Epimerase | RmlD_sub_bind | GDP_Man_Dehyd
pfam HRGMv2_0273_31 HRGMv2_0273_31_4 4805 6049 - OEP | OEP
TC HRGMv2_0273_31 HRGMv2_0273_31_5 6065 9169 - 2.A.6.1.2
TC HRGMv2_0273_31 HRGMv2_0273_31_6 9190 10416 - 2.A.6.1.5
pfam HRGMv2_0273_31 HRGMv2_0273_31_7 10581 11393 + Hydrolase | S6PP | Hydrolase_3
CAZyme HRGMv2_0273_31 HRGMv2_0273_31_8 11971 13029 + CBM9
pfam HRGMv2_0273_31 HRGMv2_0273_31_9 13085 14326 - N-glycanase_N | N-glycanase_C
CAZyme HRGMv2_0273_31 HRGMv2_0273_31_10 14351 15703 - GH29
NULL(UNKNOWN) HRGMv2_0273_31 HRGMv2_0273_31_11 15915 17018 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0273_31 HRGMv2_0273_31_12 17025 18347 - 2.A.66.1.42
STP HRGMv2_0273_31 HRGMv2_0273_31_13 18348 19556 - Aminotran_1_2
pfam HRGMv2_0273_31 HRGMv2_0273_31_14 19615 20793 - DegT_DnrJ_EryC1 | Cys_Met_Meta_PP
TC HRGMv2_0273_31 HRGMv2_0273_31_15 20807 23641 - 1.B.42.1.8
Gene ID: HRGMv2_0273_31_2
Type: CAZyme
Location: 1331 - 3526 (+)
Gene ID: HRGMv2_0273_31_3
Type: pfam
Location: 3608 - 4705 (+)
Gene ID: HRGMv2_0273_31_4
Type: pfam
Location: 4805 - 6049 (-)
Gene ID: HRGMv2_0273_31_5
Type: TC
Location: 6065 - 9169 (-)
Gene ID: HRGMv2_0273_31_6
Type: TC
Location: 9190 - 10416 (-)
Gene ID: HRGMv2_0273_31_7
Type: pfam
Location: 10581 - 11393 (+)
Gene ID: HRGMv2_0273_31_8
Type: CAZyme
Location: 11971 - 13029 (+)
Gene ID: HRGMv2_0273_31_9
Type: pfam
Location: 13085 - 14326 (-)
Gene ID: HRGMv2_0273_31_10
Type: CAZyme
Location: 14351 - 15703 (-)
Gene ID: HRGMv2_0273_31_11
Type:
Location: 15915 - 17018 (+)
Gene ID: HRGMv2_0273_31_12
Type: TC
Location: 17025 - 18347 (-)
Gene ID: HRGMv2_0273_31_13
Type: STP
Location: 18348 - 19556 (-)
Gene ID: HRGMv2_0273_31_14
Type: pfam
Location: 19615 - 20793 (-)
Gene ID: HRGMv2_0273_31_15
Type: TC
Location: 20807 - 23641 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0273_31_3 vegan > omnivore 1.62955 0.00290
HRGMv2_0273_31_5 vegan > omnivore 2.26172 0.01695
HRGMv2_0273_31_5 vegetarian > omnivore 2.64680 0.00241

🧭 Explore Read Mapping of CGC

← Back to Cluster List