Cluster: HRGMv2_0273_CGC17
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 10
- Substrate:
- Genome ID: HRGMv2_0273
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0273_9 | HRGMv2_0273_9_39 | 52494 | 54491 | + | GH20 |
| pfam | HRGMv2_0273_9 | HRGMv2_0273_9_40 | 54543 | 55640 | + | DUF4434 |
| TC | HRGMv2_0273_9 | HRGMv2_0273_9_41 | 55668 | 57077 | + | 2.A.1.1.55 |
| pfam | HRGMv2_0273_9 | HRGMv2_0273_9_42 | 57080 | 58510 | + | DUF5009 |
| CAZyme | HRGMv2_0273_9 | HRGMv2_0273_9_43 | 58700 | 60880 | - | GH89 |
| CAZyme | HRGMv2_0273_9 | HRGMv2_0273_9_44 | 60915 | 62963 | - | GH127 |
| TC | HRGMv2_0273_9 | HRGMv2_0273_9_45 | 63305 | 64945 | - | 8.A.46.2.1 |
| TC | HRGMv2_0273_9 | HRGMv2_0273_9_46 | 64991 | 68134 | - | 1.B.14.6.13 |
| NULL(UNKNOWN) | HRGMv2_0273_9 | HRGMv2_0273_9_47 | 68340 | 68480 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0273_9 | HRGMv2_0273_9_48 | 68933 | 72715 | + | GH2 |
| CAZyme | HRGMv2_0273_9 | HRGMv2_0273_9_49 | 72822 | 75014 | + | GH92 |
| CAZyme | HRGMv2_0273_9 | HRGMv2_0273_9_50 | 75106 | 77271 | + | GH92 |
| CAZyme | HRGMv2_0273_9 | HRGMv2_0273_9_51 | 77316 | 78977 | + | GH20 |
| CAZyme | HRGMv2_0273_9 | HRGMv2_0273_9_52 | 78987 | 81329 | + | GH3 |
| CAZyme | HRGMv2_0273_9 | HRGMv2_0273_9_53 | 81404 | 82858 | + | GH29 |
| CAZyme | HRGMv2_0273_9 | HRGMv2_0273_9_54 | 82923 | 85157 | + | GH92 |
Gene ID: HRGMv2_0273_9_39
Type: CAZyme
Location: 52494 - 54491 (+)
Type: CAZyme
Location: 52494 - 54491 (+)
Gene ID: HRGMv2_0273_9_40
Type: pfam
Location: 54543 - 55640 (+)
Type: pfam
Location: 54543 - 55640 (+)
Gene ID: HRGMv2_0273_9_41
Type: TC
Location: 55668 - 57077 (+)
Type: TC
Location: 55668 - 57077 (+)
Gene ID: HRGMv2_0273_9_42
Type: pfam
Location: 57080 - 58510 (+)
Type: pfam
Location: 57080 - 58510 (+)
Gene ID: HRGMv2_0273_9_43
Type: CAZyme
Location: 58700 - 60880 (-)
Type: CAZyme
Location: 58700 - 60880 (-)
Gene ID: HRGMv2_0273_9_44
Type: CAZyme
Location: 60915 - 62963 (-)
Type: CAZyme
Location: 60915 - 62963 (-)
Gene ID: HRGMv2_0273_9_45
Type: TC
Location: 63305 - 64945 (-)
Type: TC
Location: 63305 - 64945 (-)
Gene ID: HRGMv2_0273_9_46
Type: TC
Location: 64991 - 68134 (-)
Type: TC
Location: 64991 - 68134 (-)
Gene ID: HRGMv2_0273_9_47
Type:
Location: 68340 - 68480 (-)
Type:
Location: 68340 - 68480 (-)
Gene ID: HRGMv2_0273_9_48
Type: CAZyme
Location: 68933 - 72715 (+)
Type: CAZyme
Location: 68933 - 72715 (+)
Gene ID: HRGMv2_0273_9_49
Type: CAZyme
Location: 72822 - 75014 (+)
Type: CAZyme
Location: 72822 - 75014 (+)
Gene ID: HRGMv2_0273_9_50
Type: CAZyme
Location: 75106 - 77271 (+)
Type: CAZyme
Location: 75106 - 77271 (+)
Gene ID: HRGMv2_0273_9_51
Type: CAZyme
Location: 77316 - 78977 (+)
Type: CAZyme
Location: 77316 - 78977 (+)
Gene ID: HRGMv2_0273_9_52
Type: CAZyme
Location: 78987 - 81329 (+)
Type: CAZyme
Location: 78987 - 81329 (+)
Gene ID: HRGMv2_0273_9_53
Type: CAZyme
Location: 81404 - 82858 (+)
Type: CAZyme
Location: 81404 - 82858 (+)
Gene ID: HRGMv2_0273_9_54
Type: CAZyme
Location: 82923 - 85157 (+)
Type: CAZyme
Location: 82923 - 85157 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp002299635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.