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Cluster: HRGMv2_0271_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0271_49 HRGMv2_0271_49_2 1460 2656 + 2.A.1.36.3
CAZyme HRGMv2_0271_49 HRGMv2_0271_49_3 2750 5251 - GH2
CAZyme HRGMv2_0271_49 HRGMv2_0271_49_4 5272 6408 - GH53
CAZyme HRGMv2_0271_49 HRGMv2_0271_49_5 6482 7933 - GH13_6
pfam HRGMv2_0271_49 HRGMv2_0271_49_6 8057 8863 - SusF_N
pfam HRGMv2_0271_49 HRGMv2_0271_49_7 8981 10216 - SusE
TC HRGMv2_0271_49 HRGMv2_0271_49_8 10338 11960 - 8.A.46.1.1
TC HRGMv2_0271_49 HRGMv2_0271_49_9 11975 15058 - 1.B.14.6.1
CAZyme HRGMv2_0271_49 HRGMv2_0271_49_10 15245 17401 - GH97
Gene ID: HRGMv2_0271_49_2
Type: TC
Location: 1460 - 2656 (+)
Gene ID: HRGMv2_0271_49_3
Type: CAZyme
Location: 2750 - 5251 (-)
Gene ID: HRGMv2_0271_49_4
Type: CAZyme
Location: 5272 - 6408 (-)
Gene ID: HRGMv2_0271_49_5
Type: CAZyme
Location: 6482 - 7933 (-)
Gene ID: HRGMv2_0271_49_6
Type: pfam
Location: 8057 - 8863 (-)
Gene ID: HRGMv2_0271_49_7
Type: pfam
Location: 8981 - 10216 (-)
Gene ID: HRGMv2_0271_49_8
Type: TC
Location: 10338 - 11960 (-)
Gene ID: HRGMv2_0271_49_9
Type: TC
Location: 11975 - 15058 (-)
Gene ID: HRGMv2_0271_49_10
Type: CAZyme
Location: 15245 - 17401 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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