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Cluster: HRGMv2_0269_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0269_6 HRGMv2_0269_6_81 88576 90024 + 2.A.21.3.7
TC HRGMv2_0269_6 HRGMv2_0269_6_82 90056 91177 + 2.A.4.7.7
pfam HRGMv2_0269_6 HRGMv2_0269_6_83 91174 92028 - MazG | MazG
pfam HRGMv2_0269_6 HRGMv2_0269_6_84 92184 93413 - BT_3987-like_N | Laminin_G_3
CAZyme HRGMv2_0269_6 HRGMv2_0269_6_85 93455 94549 - GH18
TC HRGMv2_0269_6 HRGMv2_0269_6_86 94570 96084 - 8.A.46.2.1
TC HRGMv2_0269_6 HRGMv2_0269_6_87 96099 99164 - 1.B.14.6.13
NULL(UNKNOWN) HRGMv2_0269_6 HRGMv2_0269_6_88 99441 100919 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0269_6 HRGMv2_0269_6_89 101287 102630 - PGI
CAZyme HRGMv2_0269_6 HRGMv2_0269_6_90 102823 106296 + GH31_15
pfam HRGMv2_0269_6 HRGMv2_0269_6_91 106917 108026 + NTP_transf_5
TC HRGMv2_0269_6 HRGMv2_0269_6_92 108063 109346 - 2.A.66.1.1
Gene ID: HRGMv2_0269_6_81
Type: TC
Location: 88576 - 90024 (+)
Gene ID: HRGMv2_0269_6_82
Type: TC
Location: 90056 - 91177 (+)
Gene ID: HRGMv2_0269_6_83
Type: pfam
Location: 91174 - 92028 (-)
Gene ID: HRGMv2_0269_6_84
Type: pfam
Location: 92184 - 93413 (-)
Gene ID: HRGMv2_0269_6_85
Type: CAZyme
Location: 93455 - 94549 (-)
Gene ID: HRGMv2_0269_6_86
Type: TC
Location: 94570 - 96084 (-)
Gene ID: HRGMv2_0269_6_87
Type: TC
Location: 96099 - 99164 (-)
Gene ID: HRGMv2_0269_6_88
Type:
Location: 99441 - 100919 (+)
Gene ID: HRGMv2_0269_6_89
Type: pfam
Location: 101287 - 102630 (-)
Gene ID: HRGMv2_0269_6_90
Type: CAZyme
Location: 102823 - 106296 (+)
Gene ID: HRGMv2_0269_6_91
Type: pfam
Location: 106917 - 108026 (+)
Gene ID: HRGMv2_0269_6_92
Type: TC
Location: 108063 - 109346 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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