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Cluster: HRGMv2_0269_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0269_5 HRGMv2_0269_5_88 125747 129004 + 1.B.14.6.1
TC HRGMv2_0269_5 HRGMv2_0269_5_89 129009 130778 + 8.A.46.1.3
STP HRGMv2_0269_5 HRGMv2_0269_5_90 130797 134096 + TPR_2
CAZyme HRGMv2_0269_5 HRGMv2_0269_5_91 134101 135885 + GH93
NULL(UNKNOWN) HRGMv2_0269_5 HRGMv2_0269_5_92 135896 137746 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0269_5 HRGMv2_0269_5_93 137939 138190 - Ribosomal_L31
CAZyme HRGMv2_0269_5 HRGMv2_0269_5_94 138285 139349 - GH171
pfam HRGMv2_0269_5 HRGMv2_0269_5_95 139357 140775 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
TC HRGMv2_0269_5 HRGMv2_0269_5_96 140881 141249 + 2.A.7.34.3
pfam HRGMv2_0269_5 HRGMv2_0269_5_97 141605 143449 + DUF349 | DUF349 | DUF349 | DUF349 | DUF349
TC HRGMv2_0269_5 HRGMv2_0269_5_98 143468 145363 + 2.A.9.3.1
pfam HRGMv2_0269_5 HRGMv2_0269_5_99 145381 146040 + Ala_racemase_N
CAZyme HRGMv2_0269_5 HRGMv2_0269_5_100 146037 147203 - GT19
Gene ID: HRGMv2_0269_5_88
Type: TC
Location: 125747 - 129004 (+)
Gene ID: HRGMv2_0269_5_89
Type: TC
Location: 129009 - 130778 (+)
Gene ID: HRGMv2_0269_5_90
Type: STP
Location: 130797 - 134096 (+)
Gene ID: HRGMv2_0269_5_91
Type: CAZyme
Location: 134101 - 135885 (+)
Gene ID: HRGMv2_0269_5_92
Type:
Location: 135896 - 137746 (+)
Gene ID: HRGMv2_0269_5_93
Type: pfam
Location: 137939 - 138190 (-)
Gene ID: HRGMv2_0269_5_94
Type: CAZyme
Location: 138285 - 139349 (-)
Gene ID: HRGMv2_0269_5_95
Type: pfam
Location: 139357 - 140775 (-)
Gene ID: HRGMv2_0269_5_96
Type: TC
Location: 140881 - 141249 (+)
Gene ID: HRGMv2_0269_5_97
Type: pfam
Location: 141605 - 143449 (+)
Gene ID: HRGMv2_0269_5_98
Type: TC
Location: 143468 - 145363 (+)
Gene ID: HRGMv2_0269_5_99
Type: pfam
Location: 145381 - 146040 (+)
Gene ID: HRGMv2_0269_5_100
Type: CAZyme
Location: 146037 - 147203 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0269_5_93 vegetarian > vegan 19.55482 0.00000

🧭 Explore Read Mapping of CGC

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