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Cluster: HRGMv2_0265_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0265_2 HRGMv2_0265_2_47 53055 54755 + 3.A.1.120.6
pfam HRGMv2_0265_2 HRGMv2_0265_2_48 54805 55110 + DUF4491
pfam HRGMv2_0265_2 HRGMv2_0265_2_49 55100 55570 + SPOUT_MTase
CAZyme HRGMv2_0265_2 HRGMv2_0265_2_50 55670 58276 + GH106
CAZyme HRGMv2_0265_2 HRGMv2_0265_2_51 58316 60712 + GH2
NULL(UNKNOWN) HRGMv2_0265_2 HRGMv2_0265_2_52 60806 60973 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0265_2 HRGMv2_0265_2_53 61731 62627 + GT2
CAZyme HRGMv2_0265_2 HRGMv2_0265_2_54 62579 63559 + GT2
Gene ID: HRGMv2_0265_2_47
Type: TC
Location: 53055 - 54755 (+)
Gene ID: HRGMv2_0265_2_48
Type: pfam
Location: 54805 - 55110 (+)
Gene ID: HRGMv2_0265_2_49
Type: pfam
Location: 55100 - 55570 (+)
Gene ID: HRGMv2_0265_2_50
Type: CAZyme
Location: 55670 - 58276 (+)
Gene ID: HRGMv2_0265_2_51
Type: CAZyme
Location: 58316 - 60712 (+)
Gene ID: HRGMv2_0265_2_52
Type:
Location: 60806 - 60973 (-)
Gene ID: HRGMv2_0265_2_53
Type: CAZyme
Location: 61731 - 62627 (+)
Gene ID: HRGMv2_0265_2_54
Type: CAZyme
Location: 62579 - 63559 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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