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Cluster: HRGMv2_0265_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0265_18 HRGMv2_0265_18_16 27443 28219 + GT2
pfam HRGMv2_0265_18 HRGMv2_0265_18_17 28236 29450 + Aminotran_1_2 | DegT_DnrJ_EryC1
TC HRGMv2_0265_18 HRGMv2_0265_18_18 29460 30047 + 9.B.18.1.3
TC HRGMv2_0265_18 HRGMv2_0265_18_19 30155 32074 + 9.B.18.2.1
pfam HRGMv2_0265_18 HRGMv2_0265_18_20 32254 32721 - Lipocalin_8
TC HRGMv2_0265_18 HRGMv2_0265_18_21 32772 34340 - 1.B.73.2.2
TC HRGMv2_0265_18 HRGMv2_0265_18_22 34579 35235 + 9.B.18.1.3
Gene ID: HRGMv2_0265_18_16
Type: CAZyme
Location: 27443 - 28219 (+)
Gene ID: HRGMv2_0265_18_17
Type: pfam
Location: 28236 - 29450 (+)
Gene ID: HRGMv2_0265_18_18
Type: TC
Location: 29460 - 30047 (+)
Gene ID: HRGMv2_0265_18_19
Type: TC
Location: 30155 - 32074 (+)
Gene ID: HRGMv2_0265_18_20
Type: pfam
Location: 32254 - 32721 (-)
Gene ID: HRGMv2_0265_18_21
Type: TC
Location: 32772 - 34340 (-)
Gene ID: HRGMv2_0265_18_22
Type: TC
Location: 34579 - 35235 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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