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Cluster: HRGMv2_0265_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0265_16 HRGMv2_0265_16_6 5786 6997 + GH23
pfam HRGMv2_0265_16 HRGMv2_0265_16_7 7142 8596 - tRNA_U5-meth_tr | Methyltransf_15 | Methyltransf_31
TC HRGMv2_0265_16 HRGMv2_0265_16_8 8983 11703 + 4.A.2.1.17
TC HRGMv2_0265_16 HRGMv2_0265_16_9 11971 13608 - 3.A.1.121.4
NULL(UNKNOWN) HRGMv2_0265_16 HRGMv2_0265_16_10 13834 14292 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0265_16 HRGMv2_0265_16_11 14323 14979 + DUF3256
CAZyme HRGMv2_0265_16 HRGMv2_0265_16_12 15136 16599 - GH28
TC HRGMv2_0265_16 HRGMv2_0265_16_13 16844 18079 + 2.A.1.10.2
pfam HRGMv2_0265_16 HRGMv2_0265_16_14 18164 18886 + Methyltrans_RNA | PUA_4
pfam HRGMv2_0265_16 HRGMv2_0265_16_15 18897 20237 + DUF4836
TC HRGMv2_0265_16 HRGMv2_0265_16_16 20242 20934 + 3.A.1.125.2
Gene ID: HRGMv2_0265_16_6
Type: CAZyme
Location: 5786 - 6997 (+)
Gene ID: HRGMv2_0265_16_7
Type: pfam
Location: 7142 - 8596 (-)
Gene ID: HRGMv2_0265_16_8
Type: TC
Location: 8983 - 11703 (+)
Gene ID: HRGMv2_0265_16_9
Type: TC
Location: 11971 - 13608 (-)
Gene ID: HRGMv2_0265_16_10
Type:
Location: 13834 - 14292 (+)
Gene ID: HRGMv2_0265_16_11
Type: pfam
Location: 14323 - 14979 (+)
Gene ID: HRGMv2_0265_16_12
Type: CAZyme
Location: 15136 - 16599 (-)
Gene ID: HRGMv2_0265_16_13
Type: TC
Location: 16844 - 18079 (+)
Gene ID: HRGMv2_0265_16_14
Type: pfam
Location: 18164 - 18886 (+)
Gene ID: HRGMv2_0265_16_15
Type: pfam
Location: 18897 - 20237 (+)
Gene ID: HRGMv2_0265_16_16
Type: TC
Location: 20242 - 20934 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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